RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KIAA0513O60268 411 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 WDR1O75083 606 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 CYP7B1O75881 506 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 ACTL6AO96019 429 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 ZCCHC18P0CG32 403 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 LCN1P31025 176 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 CRATP43155 626 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 SMSP52788 366 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 ARFIP2P53365 341 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 CLDN20P56880 219 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 ZNF141Q15928 474 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 PLPPR5Q32ZL2 321 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 RPS26P11Q5JNZ5 115 aaPredicted RBP10.41□□□□□ -0.74
VMP1-211ENST00000591315 ATAD3BQ5T9A4 648 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 MTFR2Q6P444 385 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 MSANTD1Q6ZTZ1 278 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 UBQLNLQ8IYU4 475 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 TRIML2Q8N7C3 387 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 C9orf106Q8NAJ2 232 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 OR10Q1Q8NGQ4 319 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 B4GALNT2Q8NHY0 566 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 STON2Q8WXE9 905 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 RND1Q92730 232 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 TRIB1Q96RU8 372 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 HOXD1Q9GZZ0 328 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 CCDC134Q9H6E4 229 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 TMEM185BQ9H7F4 350 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 RMND5AQ9H871 391 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 EXD2Q9NVH0 621 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 VAPAQ9P0L0 249 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 ICAM5Q9UMF0 924 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 WDR45Q9Y484 360 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 TACC2O95359 2948 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 HCFC1P51610 2035 aa10.41□□□□□ -0.74
VMP1-211ENST00000591315 MPDZO75970 2070 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 TRBV5-3A0A0A0MS03 114 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 FAM90A27PA6NNH2 459 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 AHRRA9YTQ3 701 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 PRSS44E7EML9 344 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 H0Y3Z8 333 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 GTPBP1O00178 669 aaKnown RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 CLIC1O00299 241 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 SEC14L5O43304 696 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 ADAM11O75078 769 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 KRT75O95678 551 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 EPPINO95925 133 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 AK1P00568 194 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 SNRPB2P08579 225 aaKnown RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
VMP1-211ENST00000591315 NR2F1P10589 423 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 CPN1P15169 458 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 ZNF708P17019 499 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 POU3F2P20265 443 aaPredicted RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 CHMP24386 653 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 PSMA4P25789 261 aaKnown RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 HTR1EP28566 365 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 SHC1P29353 583 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 AGFG1P52594 562 aaKnown RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 SEC24CP53992 1094 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 LRRC74AQ0VAA2 488 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 SELPLGQ14242 412 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 LRIF1Q5T3J3 769 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 TMEM211Q6ICI0 200 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 XKRXQ6PP77 449 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 DLEU7Q6UYE1 221 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 ZNF619Q8N2I2 560 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 GPR119Q8TDV5 335 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 CNOT9Q92600 299 aaKnown RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 MAL2Q969L2 176 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 RNF145Q96MT1 663 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 RSPO3Q9BXY4 272 aaPredicted RBP10.4□□□□□ -0.74
VMP1-211ENST00000591315 NMUR2Q9GZQ4 415 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 SAP130Q9H0E3 1048 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 PTGES2Q9H7Z7 377 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 L3MBTL1Q9Y468 752 aa10.4□□□□□ -0.74
VMP1-211ENST00000591315 FBN2P35556 2912 aa10.4□□□□□ -0.75
VMP1-211ENST00000591315 A0A1W2PP18 115 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 CLCA1A8K7I4 914 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 FBP2O00757 339 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 SOX30O94993 753 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 CLDN14O95500 239 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 NUDT14O95848 222 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 TGM6O95932 706 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 AGR2O95994 175 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 TFPTP0C1Z6 253 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 LINGO3P0C6S8 592 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 UBTFL6P0CB48 400 aaPredicted RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 UBL4AP11441 157 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 PEPDP12955 493 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 GABRA1P14867 456 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 PGM1P36871 562 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 CCR4P51679 360 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 DSTNP60981 165 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 FOXF1Q12946 379 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 FOXF2Q12947 444 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 SKP2Q13309 424 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 ART3Q13508 389 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 GANABQ14697 944 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms