RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 DSTNP60981 165 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 PMPCAQ10713 525 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ART3Q13508 389 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 GNA13Q14344 377 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 RGNQ15493 299 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 SYPL1Q16563 259 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 TMEM44Q2T9K0 475 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 PLPPR5Q32ZL2 321 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ACSF3Q4G176 576 aaPredicted RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 PAGE3Q5JUK9 113 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ARSKQ6UWY0 536 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 LRRC74BQ6ZQY2 392 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 NCCRP1Q6ZVX7 275 aaPredicted RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 EIF3MQ7L2H7 374 aaKnown RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 MED12LQ86YW9 2145 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 LACC1Q8IV20 430 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 GTPBP8Q8N3Z3 284 aaPredicted RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 TOR1AIP2Q8NFQ8 470 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ZPLD1Q8TCW7 415 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ZBTB8AQ96BR9 441 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 MED17Q9NVC6 651 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 SLC25A37Q9NYZ2 338 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 CALML5Q9NZT1 146 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 STOML1Q9UBI4 398 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 PLEKHB1Q9UF11 243 aaPredicted RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 KCNE5Q9UJ90 142 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 LEF1Q9UJU2 399 aaPredicted RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 ICAM5Q9UMF0 924 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 CORO2BQ9UQ03 480 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 VDAC3Q9Y277 283 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 SLC35A3Q9Y2D2 325 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 CARD8Q9Y2G2 431 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 NDUFAF1Q9Y375 327 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 TRBV5-3A0A0A0MS03 114 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CENPVL1A0A0U1RR11 272 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 A1L4Q6 167 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 OR2M5A3KFT3 312 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 TMEM247A6NEH6 219 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 AGAP5A6NIR3 686 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CD8B2A6NJW9 211 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 H0Y3Z8 333 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 NUDT14O95848 222 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 EPPINO95925 133 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CSTAP01040 98 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CHRM4P08173 479 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SNRPB2P08579 225 aaKnown RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 BMP2P12643 396 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 PEPDP12955 493 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 GP1BBP13224 206 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 POU3F2P20265 443 aaPredicted RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 ADSLP30566 484 aaPredicted RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 CHRNB4P30926 498 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 EIF1P41567 113 aaKnown RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 CRISP3P54108 245 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CLDN18P56856 261 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 NUP107P57740 925 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CHRNEQ04844 493 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SKP2Q13309 424 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 FGFBP1Q14512 234 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 NSUN5P2Q63ZY6 315 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CBLN3Q6UW01 205 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 OLIG3Q7RTU3 272 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 MSRB3Q8IXL7 192 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 DPP10Q8N608 796 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 ANKFN1Q8N957 763 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 OR5W2Q8NH69 310 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 CA5BP1Q8WTZ4 195 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 ASB5Q8WWX0 329 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SDCCAG3Q96C92 435 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SLC38A1Q9H2H9 487 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 MTHFD2LQ9H903 347 aaPredicted RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 CALHM2Q9HA72 323 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SAR1AQ9NR31 198 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 VAPAQ9P0L0 249 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 SLAMF8Q9P0V8 285 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 ZNF337Q9Y3M9 751 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
LIG3-213ENST00000590630 AP4B1Q9Y6B7 739 aa10.76□□□□□ -0.69
LIG3-213ENST00000590630 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 CLDN14O95500 239 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 TFPTP0C1Z6 253 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 LINGO3P0C6S8 592 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 CD1EP15812 388 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 RPS4Y1P22090 263 aaKnown RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 TIMP3P35625 211 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 STARP49675 285 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 RNF144AP50876 292 aaPredicted RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 EEFSECP57772 596 aaKnown RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 SRYQ05066 204 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 SF3A3Q12874 501 aaKnown RBP eCLIP10.75□□□□□ -0.691e-7■■■■□ 19.8
LIG3-213ENST00000590630 CBFBQ13951 182 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 MAPK14Q16539 360 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 RIPPLY2Q5TAB7 128 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 PRAMEF8Q5VWM4 474 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 PRAMEF7Q5VXH5 474 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 DLEU7Q6UYE1 221 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms