RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NID1P14543 1247 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 DPP4P27487 766 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 AQP1P29972 269 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 SRD5A2P31213 254 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 DSCR4P56555 118 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-214ENST00000590556 LARS2Q15031 903 aaKnown RBP17.41■□□□□ 0.38
DDX39A-214ENST00000590556 NDUFAF6Q330K2 333 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 LIN52Q52LA3 116 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 INTS11Q5TA45 600 aaKnown RBP17.41■□□□□ 0.38
DDX39A-214ENST00000590556 GFRALQ6UXV0 394 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 VRK2Q86Y07 508 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 CMIPQ8IY22 773 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 PGAM4Q8N0Y7 254 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 TMCO5AQ8N6Q1 288 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 OR2T12Q8NG77 320 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 SPATA5L1Q9BVQ7 753 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 LAT2Q9GZY6 243 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 EXO5Q9H790 373 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 ADA2Q9NZK5 511 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 USP22Q9UPT9 525 aa17.41■□□□□ 0.38
DDX39A-214ENST00000590556 ZNF443Q9Y2A4 671 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-214ENST00000590556 SERPINB7O75635 380 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 IGHG3P01860 377 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 THBS1P07996 1170 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 PABPC4LP0CB38 370 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 UBTFL6P0CB48 400 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 PGM1P36871 562 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 P2RX1P51575 399 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 PCBP3P57721 371 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 EEFSECP57772 596 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 GANABQ14697 944 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 IGFBP7Q16270 282 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 EIPR1Q53HC9 387 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 ZNF311Q5JNZ3 666 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 CBLN3Q6UW01 205 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 TRILQ7L0X0 811 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 YRDCQ86U90 279 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 MICU2Q8IYU8 434 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 GHDCQ8N2G8 530 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 ST6GALNAC3Q8NDV1 305 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 FAM83FQ8NEG4 500 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 OR14L1PQ8NHC6 308 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 C1GALT1C1Q96EU7 318 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 OR2B2Q9GZK3 357 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 TAS2R10Q9NYW0 307 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 TMEM181Q9P2C4 612 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 ABCD2Q9UBJ2 740 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 ICAM5Q9UMF0 924 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 MRPS18CQ9Y3D5 142 aaKnown RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 LIPGQ9Y5X9 500 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 GPC6Q9Y625 555 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-214ENST00000590556 DNAJC13O75165 2243 aa17.4■□□□□ 0.38
DDX39A-214ENST00000590556 TRGV5A0A0B4J1U4 118 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ELOVL7A1L3X0 281 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ANKUB1A6NFN9 424 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 FAM47E-STBD1D6RA91 191 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ZIC3O60481 467 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 HCN1O60741 890 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 NUDT14O95848 222 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 HK1P19367 917 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 TCEA1P23193 301 aaKnown RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 GSK3BP49841 420 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 CCR4P51679 360 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 SUMO3P55854 103 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 FOXK1P85037 733 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 HSF1Q00613 529 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 SKP2Q13309 424 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 VEZF1Q14119 521 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ZSWIM7Q19AV6 140 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 WIPI1Q5MNZ9 446 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 MRPL2Q5T653 305 aaKnown RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ZNF836Q6ZNA1 936 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 PATL1Q86TB9 770 aaKnown RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ARMC8Q8IUR7 673 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 DEFB107AQ8IZN7 70 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 GALNT11Q8NCW6 608 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 TOR1AIP2Q8NFQ8 470 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 OR5W2Q8NH69 310 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 CNOT9Q92600 299 aaKnown RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 SLC6A15Q9H2J7 730 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ALG2Q9H553 416 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ARMC7Q9H6L4 198 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 PLSCR2Q9NRY7 297 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 GMPR2Q9P2T1 348 aaKnown RBP17.39■□□□□ 0.37
DDX39A-214ENST00000590556 ZGRF1Q86YA3 2104 aa17.39■□□□□ 0.37
DDX39A-214ENST00000590556 SPENQ96T58 3664 aaKnown RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 A0A087WZY1 265 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 A0A1B0GTH9 108 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 PRORSD1PA6NEY8 169 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 M0QX08 132 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 SUSD5O60279 629 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 DNAJA2O60884 412 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 BCAS1O75363 584 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 GCM2O75603 506 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 ZNF41P51814 821 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 EEF1A1P68104 462 aaKnown RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 ELOAQ14241 798 aaKnown RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 RNF220Q5VTB9 566 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 ARHGAP11AQ6P4F7 1023 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 ARSKQ6UWY0 536 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms