RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZNF141Q15928 474 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 CMPK2Q5EBM0 449 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 ZNF614Q8N883 585 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 OR1J4Q8NGS1 313 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 OR10A6Q8NH74 314 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 POM121Q96HA1 1249 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 POLE3Q9NRF9 147 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 CMTM6Q9NX76 183 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 MED11Q9P086 117 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 PPP4R1LQ9P1A2 415 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 TAGLN3Q9UI15 199 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 CORO2BQ9UQ03 480 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 C15orf41Q9Y2V0 281 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 LIPGQ9Y5X9 500 aa19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 SETD2Q9BYW2 2564 aaPredicted RBP19.52■□□□□ 0.72
R3HDM4-206ENST00000590454 PKDREJQ9NTG1 2253 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 FREM3P0C091 2139 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 CLDN24A6NM45 220 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 SCDO00767 359 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 NDUFB5O43674 189 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 PDE9AO76083 593 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 HPCAP84074 193 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 HSF1Q00613 529 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 KRT72Q14CN4 511 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 C3AR1Q16581 482 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 SLC22A16Q86VW1 577 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 PLCZ1Q86YW0 608 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 ZZZ3Q8IYH5 903 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 OR8J3Q8NGG0 315 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 ARSGQ96EG1 525 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 TREX2Q9BQ50 279 aaPredicted RBP19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 RSPO3Q9BXY4 272 aaPredicted RBP19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 HOXD1Q9GZZ0 328 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 UBQLN3Q9H347 655 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 DSN1Q9H410 356 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 ZDHHC11Q9H8X9 412 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 DTNAQ9Y4J8 743 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 ZFHX3Q15911 3703 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 DSPPQ9NZW4 1301 aa19.51■□□□□ 0.71
R3HDM4-206ENST00000590454 MED13LQ71F56 2210 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 ZNF407Q9C0G0 2248 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 A0A1W2PQD3 144 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 CCT8L1PA6NM43 557 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 HPGDP15428 266 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 CLK3P49761 638 aaKnown RBP19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 CDK6Q00534 326 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 PLAURQ03405 335 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 CYP51A1Q16850 503 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 NET1Q7Z628 596 aaPredicted RBP19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 CALHM3Q86XJ0 350 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 SLC15A3Q8IY34 581 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 FADS6Q8N9I5 356 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 OR2M3Q8NG83 312 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 PHOSPHO1Q8TCT1 267 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 SH3YL1Q96HL8 342 aaPredicted RBP19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 SPOCK3Q9BQ16 436 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 TMEM38AQ9H6F2 299 aa19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 THUMPD1Q9NXG2 353 aaKnown RBP19.5■□□□□ 0.71
R3HDM4-206ENST00000590454 SERINC4A6NH21 518 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 AGAP5A6NIR3 686 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 ACOT7O00154 380 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 PGM3O95394 542 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 T-ENOLP0DO92 83 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 RPS4Y1P22090 263 aaKnown RBP19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 GDF1P27539 372 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 CRISP3P54108 245 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 ZNF117Q03924 483 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 TLE4Q04727 773 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 C17orf67Q0P5P2 114 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 SCARB2Q14108 478 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 CBLN3Q6UW01 205 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 HACD2Q6Y1H2 254 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 FAM109AQ8N4B1 249 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 ZNF527Q8NB42 609 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 GPR137Q96N19 417 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 MTHFD2LQ9H903 347 aaPredicted RBP19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 MCCC2Q9HCC0 563 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 TINAGQ9UJW2 476 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 L3MBTL1Q9Y468 752 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 CCDC168Q8NDH2 2452 aa19.49■□□□□ 0.71
R3HDM4-206ENST00000590454 IGLV3-32A0A0A0MS00 114 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 NME4O00746 187 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 CDC40O60508 579 aaKnown RBP eCLIP19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 TCEA1P23193 301 aaKnown RBP19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 SLC7A2P52569 658 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 PSME3P61289 254 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 EIPR1Q53HC9 387 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 FGD2Q7Z6J4 655 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 SERPINA11Q86U17 422 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 VRK2Q86Y07 508 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 SPPL2CQ8IUH8 684 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 CHERPQ8IWX8 916 aaKnown RBP19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 OR4K17Q8NGC6 315 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 ZNF524Q96C55 264 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 SLC6A15Q9H2J7 730 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 SDHAF3Q9NRP4 125 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 CARD8Q9Y2G2 431 aa19.48■□□□□ 0.71
R3HDM4-206ENST00000590454 MED12Q93074 2177 aa19.47■□□□□ 0.71
R3HDM4-206ENST00000590454 A0A0G2JPF8 293 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms