RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 UCK1Q9HA47 277 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 BAIAP2Q9UQB8 552 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 MTCH2Q9Y6C9 303 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC9B1P1A6NJY1 282 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 CLDN4O14493 209 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 BHLHE40O14503 412 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 CHP2O43745 196 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 HCN1O60741 890 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 HLA-DPB1P04440 258 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 ZGLP1P0C6A0 271 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 S1PR1P21453 382 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 RBM34P42696 430 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 PSMD4P55036 377 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 BDH1Q02338 343 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 MXD1Q05195 221 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 HNRNPA0Q13151 305 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 OR8H2Q8N162 312 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 ZBTB8BQ8NAP8 495 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 OR6C4Q8NGE1 309 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 PFN4Q8NHR9 129 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 ASB15Q8WXK1 588 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 OTULINQ96BN8 352 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF578Q96N58 590 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 ASB6Q9NWX5 421 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 IL20RAQ9UHF4 553 aa17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 CAB39Q9Y376 341 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 TDRD6O60522 2096 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-209ENST00000589838 TTC36A6NLP5 189 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 CHURC1-FNTBB4DL54 471 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 HCRTR1O43613 425 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC2A10O95528 541 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 GALP22466 123 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 COL13A1Q5TAT6 717 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SMARCD3Q6STE5 483 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 Q6ZS52 159 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF550Q7Z398 422 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 BBS1Q8NFJ9 593 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 TSTD1Q8NFU3 115 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 CAPN10Q9HC96 672 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC2A4RGQ9NR83 387 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 REV3LO60673 3130 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 TMEM131Q92545 1883 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 A0A0A6YYC8 382 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 A0A0B4J2E0 115 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 A0A1B0GX12 115 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 I3L1I5 382 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SOCS6O14544 535 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 MSL3P1P0C860 447 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SAGP10523 405 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SDC2P34741 201 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 IGLV3-21P80748 117 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 PSG6Q00889 435 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 GPR50Q13585 617 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 FAM53BQ14153 422 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 PDZK1Q5T2W1 519 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 DDI2Q5TDH0 399 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 NIPAL3Q6P499 406 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 PLBD1Q6P4A8 553 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 DGAT2L6Q6ZPD8 337 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 ACBD7Q8N6N7 88 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 CNOT9Q92600 299 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SDHCQ99643 169 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 G6PC3Q9BUM1 346 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 IFT27Q9BW83 186 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 ATP13A2Q9NQ11 1180 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 PRTFDC1Q9NRG1 225 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 CMC2Q9NRP2 79 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 INPP5EQ9NRR6 644 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 C20orf141Q9NUB4 165 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 CDH23Q9H251 3354 aa17.73■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC22A31A6NKX4 558 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 H3BQ06 376 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 NSA2O95478 260 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 PROS1P07225 676 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 TBXA2RP21731 343 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 FASLGP48023 281 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 RFX3P48380 749 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 EMDP50402 254 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 RNF144AP50876 292 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 FABP5Q01469 135 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF322Q6U7Q0 402 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 SHISA5Q8N114 240 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF614Q8N883 585 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 SPRYD4Q8WW59 207 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 DGAT2Q96PD7 388 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 TM9SF2Q99805 663 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 RERGLQ9H628 205 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 PLEKHB1Q9UF11 243 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 SIGLEC7Q9Y286 467 aa17.72■□□□□ 0.43
PRKCSH-209ENST00000589838 LILRA5A6NI73 299 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 RIIAD1A6NNX1 92 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 J3QRE1 110 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 SNPHO15079 494 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 AQP9O43315 295 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 PRAMEF2O60811 474 aa17.71■□□□□ 0.43
PRKCSH-209ENST00000589838 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms