RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 QPCTLQ9NXS2 382 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 PACSIN3Q9UKS6 424 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 SLC35A3Q9Y2D2 325 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 GPC6Q9Y625 555 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 GCM2O75603 506 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 CYP7B1O75881 506 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 PDE9AO76083 593 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 HPNP05981 417 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 THBS1P07996 1170 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 PABPC4LP0CB38 370 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 UBTFL6P0CB48 400 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 EEFSECP57772 596 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 HSF1Q00613 529 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 C19orf57Q0VDD7 668 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 SKP2Q13309 424 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 SLC10A1Q14973 349 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 MRPL2Q5T653 305 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 BNC2Q6ZN30 1099 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 KRT73Q86Y46 540 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 SLC30A8Q8IWU4 369 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 MICU2Q8IYU8 434 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 DEFB107AQ8IZN7 70 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 TMCO5AQ8N6Q1 288 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 FAM71CQ8NEG0 241 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 FAM83FQ8NEG4 500 aaPredicted RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 ARSGQ96EG1 525 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 SLC6A15Q9H2J7 730 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 CACYBPQ9HB71 228 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 DKKL1Q9UK85 242 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 ICAM5Q9UMF0 924 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 ZGRF1Q86YA3 2104 aa17.25■□□□□ 0.35
CLPTM1-209ENST00000588855 ELOVL7A1L3X0 281 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 EIF4E2O60573 245 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 ENDOUP21128 410 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 TCEA1P23193 301 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 DPP4P27487 766 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 SRD5A2P31213 254 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 EEF1A1P68104 462 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 LARS2Q15031 903 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 EIPR1Q53HC9 387 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF311Q5JNZ3 666 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 C6orf89Q6UWU4 347 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 YRDCQ86U90 279 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 SPPL2CQ8IUH8 684 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 RNF148Q8N7C7 305 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 CNOT9Q92600 299 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 MIB2Q96AX9 1013 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 C1GALT1C1Q96EU7 318 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF607Q96SK3 696 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 OR2B2Q9GZK3 357 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 PTGES2Q9H7Z7 377 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 HHATLQ9HCP6 504 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 PLSCR2Q9NRY7 297 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 RLIMQ9NVW2 624 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 DNAJB12Q9NXW2 375 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 CHST2Q9Y4C5 530 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 MED12Q93074 2177 aa17.24■□□□□ 0.35
CLPTM1-209ENST00000588855 IGHG3P01860 377 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 OPN1SWP03999 348 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 EDN3P14138 238 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 MSX1P28360 303 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 P2RX1P51575 399 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 CCR4P51679 360 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 DSCR4P56555 118 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 VEZF1Q14119 521 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 GANABQ14697 944 aaKnown RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 WIPI1Q5MNZ9 446 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 INTS11Q5TA45 600 aaKnown RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 RNF220Q5VTB9 566 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 ARSKQ6UWY0 536 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 CMIPQ8IY22 773 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 KCTD14Q9BQ13 255 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 SPATA5L1Q9BVQ7 753 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 LAT2Q9GZY6 243 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 ACKR4Q9NPB9 350 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 SEC14L3Q9UDX4 400 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 IFT52Q9Y366 437 aa17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 RP1L1Q8IWN7 2480 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-209ENST00000588855 CDHR4A6H8M9 788 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 PRORSD1PA6NEY8 169 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 ANKUB1A6NFN9 424 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNHIT1O43257 154 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 CRYBA2P53672 197 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 DMTNQ08495 405 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 IGFBP7Q16270 282 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 KRTCAP3Q53RY4 240 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 CCDC80Q76M96 950 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 TRILQ7L0X0 811 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 PATL1Q86TB9 770 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 ARMC8Q8IUR7 673 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 CLIP4Q8N3C7 705 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 OR14L1PQ8NHC6 308 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 CDRT15Q96T59 188 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 LDAHQ9H6V9 325 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 TAS2R10Q9NYW0 307 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 TAS2R1Q9NYW7 299 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF232Q9UNY5 417 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 VDAC3Q9Y277 283 aa17.22■□□□□ 0.35
CLPTM1-209ENST00000588855 TRGV5A0A0B4J1U4 118 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms