RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 TFF3Q07654 80 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 C6orf10Q5SRN2 563 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 METTL21CQ5VZV1 264 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 ZNF787Q6DD87 383 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 FRRS1Q6ZNA5 592 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 ZNF619Q8N2I2 560 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 ACBD4Q8NC06 268 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 RFWD2Q8NHY2 731 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 WNT2BQ93097 391 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 SPDL1Q96EA4 605 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 ARSGQ96EG1 525 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 ZFP3Q96NJ6 502 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 TM9SF2Q99805 663 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 PAIP1Q9H074 479 aaKnown RBP14.5□□□□□ -0.09
RETREG3-206ENST00000588423 CCDC134Q9H6E4 229 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 TPT1P8Q9HAU6 139 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 KCNJ16Q9NPI9 418 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 SLC52A3Q9NQ40 469 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 THUMPD1Q9NXG2 353 aaKnown RBP14.5□□□□□ -0.09
RETREG3-206ENST00000588423 CCDC167Q9P0B6 97 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 CLCF1Q9UBD9 225 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 KCNE5Q9UJ90 142 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 CARD8Q9Y2G2 431 aa14.5□□□□□ -0.09
RETREG3-206ENST00000588423 UTP20O75691 2785 aaKnown RBP14.5□□□□□ -0.09
RETREG3-206ENST00000588423 A0A096LPI6 279 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 PRAMEF27A3QJZ7 478 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 CLCA1A8K7I4 914 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 H3BML4 177 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 DNAJA2O60884 412 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 LINGO3P0C6S8 592 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 HOXB9P17482 250 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-206ENST00000588423 PSMA4P25789 261 aaKnown RBP14.49□□□□□ -0.09
RETREG3-206ENST00000588423 FGFBP1Q14512 234 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 GPAT3Q53EU6 434 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 COX20Q5RI15 118 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 LRIF1Q5T3J3 769 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 SLC2A7Q6PXP3 512 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 CBLN3Q6UW01 205 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 DNAJC14Q6Y2X3 702 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-206ENST00000588423 LRRC74BQ6ZQY2 392 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 LIX1LQ8IVB5 337 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 ZNF614Q8N883 585 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 NAXEQ8NCW5 288 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 OR5M1Q8NGP8 315 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 OR5W2Q8NH69 310 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 GPR119Q8TDV5 335 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 THOC1Q96FV9 657 aaKnown RBP14.49□□□□□ -0.09
RETREG3-206ENST00000588423 SPOCK3Q9BQ16 436 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 LAT2Q9GZY6 243 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 ENKD1Q9H0I2 346 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 ZNF385DQ9H6B1 395 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 RUBCNLQ9H714 662 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 DCTN4Q9UJW0 460 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 SLC35A3Q9Y2D2 325 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 L3MBTL1Q9Y468 752 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 PCDHB14Q9Y5E9 798 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 GPC6Q9Y625 555 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-206ENST00000588423 GMEB1Q9Y692 573 aa14.49□□□□□ -0.09
RETREG3-206ENST00000588423 FREM3P0C091 2139 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 SETXQ7Z333 2677 aaKnown RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 FAM90A27PA6NNH2 459 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 C19orf84I3L1E1 186 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 ETV2O00321 342 aaPredicted RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 DVL2O14641 736 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 RCBTB2O95199 551 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 H6PDO95479 791 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 IL18BPO95998 194 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 TROVE2P10155 538 aaKnown RBP eCLIP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 CTSSP25774 331 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 ELK4P28324 431 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 ZNF136P52737 540 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 CLDN15P56746 228 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 RAC1P63000 192 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 CBFBQ13951 182 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 MAPK14Q16539 360 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 SYPL1Q16563 259 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 GTDC1Q4AE62 458 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 AGKQ53H12 422 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 POMZP3Q6PJE2 187 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 EIF3MQ7L2H7 374 aaKnown RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 CHMP1BQ7LBR1 199 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 METTL25Q8N6Q8 603 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 C9orf106Q8NAJ2 232 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 POC1BQ8TC44 478 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 PNPT1Q8TCS8 783 aaKnown RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 TREX2Q9BQ50 279 aaPredicted RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 KLHDC3Q9BQ90 382 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 UCK2Q9BZX2 261 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 SLC38A1Q9H2H9 487 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 RAD21L1Q9H4I0 556 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 MRGBPQ9NV56 204 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 P2RX2Q9UBL9 471 aa14.48□□□□□ -0.09
RETREG3-206ENST00000588423 NUP214P35658 2090 aaPredicted RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 SPTAN1Q13813 2472 aaKnown RBP14.48□□□□□ -0.09
RETREG3-206ENST00000588423 A0A0G2JND7 137 aa14.47□□□□□ -0.09
RETREG3-206ENST00000588423 CENPVL1A0A0U1RR11 272 aa14.47□□□□□ -0.09
RETREG3-206ENST00000588423 A0A1W2PP18 115 aa14.47□□□□□ -0.09
RETREG3-206ENST00000588423 NKX2-6A6NCS4 301 aa14.47□□□□□ -0.09
RETREG3-206ENST00000588423 NR5A2O00482 541 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms