RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 HDHD5Q9BXW7 423 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TXLNGYQ9BZA5 131 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TUBB1Q9H4B7 451 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TIGARQ9NQ88 270 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ACSS1Q9NUB1 689 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 SNX8Q9Y5X2 465 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 NPIPA5A0A0B4J1W7 369 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 NPIPA7E9PJI5 369 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 COPEO14579 308 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 TBX19O60806 448 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 CHEK2O96017 543 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 PABPC4LP0CB38 370 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 NPIPA8P0DM63 369 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 PSMB1P20618 241 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 LCN1P31025 176 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 CRHR1P34998 444 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 EIF1P41567 113 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 RPS4XP62701 263 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF117Q03924 483 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 FOXF1Q12946 379 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 PDE7AQ13946 482 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ZCCHC12Q6PEW1 402 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 C10orf107Q8IVU9 208 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 DDIASQ8IXT1 998 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 GSPT2Q8IYD1 628 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 LILRB1Q8NHL6 650 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 FBXO27Q8NI29 283 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF764Q96H86 408 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 GATA5Q9BWX5 397 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-205ENST00000587888 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 SRXN1Q9BYN0 137 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 CARD8Q9Y2G2 431 aa12.61□□□□□ -0.39
ERCC1-205ENST00000587888 A0A1W2PQD3 144 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 GTPBP1O00178 669 aaKnown RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 LSM1O15116 133 aaKnown RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 OIP5O43482 229 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 GCM2O75603 506 aaPredicted RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 PRKD3O94806 890 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 HSPA4LO95757 839 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 ADAP00813 363 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 BCKDHAP12694 445 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 KRT4P19013 534 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 IL32P24001 234 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 VEZF1Q14119 521 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 TOMM34Q15785 309 aaPredicted RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 CLEC12BQ2HXU8 276 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 SFRP5Q5T4F7 317 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 CBLN3Q6UW01 205 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 R3HCC1LQ7Z5L2 792 aaKnown RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 UBLCP1Q8WVY7 318 aaPredicted RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 NEUROG1Q92886 237 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 CPNE4Q96A23 557 aaPredicted RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 FCRL1Q96LA6 429 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
ERCC1-205ENST00000587888 GIMAP2Q9UG22 337 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 RNF115Q9Y4L5 304 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 DNAJC15Q9Y5T4 150 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
ERCC1-205ENST00000587888 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 GJE1A6NN92 205 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 TMEM233B4DJY2 109 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 C9JVG2 144 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 TMCC2O75069 709 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 CD3EP07766 207 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 YES1P07947 543 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 SOD3P08294 240 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 NEFHP12036 1026 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 ENPP1P22413 925 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 CDKN1AP38936 164 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 ASMTP46597 345 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 CCT3P49368 545 aaKnown RBP12.59□□□□□ -0.39
ERCC1-205ENST00000587888 P2RX1P51575 399 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 NDUFAF6Q330K2 333 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 KLHL26Q53HC5 615 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 KANK2Q63ZY3 851 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 TFAP2EQ6VUC0 442 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
ERCC1-205ENST00000587888 ATG4DQ86TL0 474 aaPredicted RBP12.59□□□□□ -0.39
ERCC1-205ENST00000587888 CNPY4Q8N129 248 aa12.59□□□□□ -0.39
ERCC1-205ENST00000587888 C4orf33Q8N1A6 199 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms