RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 OR6T1Q8NGN1 323 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 OR2T29Q8NH02 315 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 PHF10Q8WUB8 498 aaKnown RBP13.66□□□□□ -0.22
NFIX-208ENST00000587260 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
NFIX-208ENST00000587260 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 MAP1BP46821 2468 aaKnown RBP13.66□□□□□ -0.22
NFIX-208ENST00000587260 MGAQ8IWI9 3026 aa13.66□□□□□ -0.22
NFIX-208ENST00000587260 C17orf51A8MQB3 221 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 G3V3Y1 287 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 M0R3H8 397 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 FMO6PO60774 539 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 SEMA7AO75326 666 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 CCL3P10147 92 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 EVI2BP34910 448 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 CD96P40200 585 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 ZNF136P52737 540 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 GK3PQ14409 553 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 OR1C1Q15619 314 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 NPTX1Q15818 432 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 SPINK14Q6IE38 97 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 TMEM81Q6P7N7 255 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 RTL4Q6ZR62 310 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 MDGA2Q7Z553 956 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 ZNF605Q86T29 641 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 GRHL3Q8TE85 626 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 NR4A3Q92570 626 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 TMCO6Q96DC7 493 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 SECISBP2Q96T21 854 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 PIP5K1AQ99755 562 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 POLR2J2Q9GZM3 115 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 POLR2J3Q9H1A7 115 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 METTL7AQ9H8H3 244 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 GALNT9Q9HCQ5 603 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 DNAJB12Q9NXW2 375 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 KLRF1Q9NZS2 232 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 FAM32AQ9Y421 112 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 CSAG2Q9Y5P2 127 aa13.65□□□□□ -0.22
NFIX-208ENST00000587260 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
NFIX-208ENST00000587260 OR5H15A6NDH6 313 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 MKRN2OSH3BPM6 223 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ADAM10O14672 748 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 TP53I11O14683 189 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ADAMDEC1O15204 470 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 TPST2O60704 377 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 PTDSS1P48651 473 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 HMGA2P52926 109 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 OGFRL1Q5TC84 451 aaPredicted RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 C19orf48Q6RUI8 117 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ZNF227Q86WZ6 799 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 RBM45Q8IUH3 476 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 GPALPP1Q8IXQ4 340 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 VANGL1Q8TAA9 524 aaPredicted RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 NRG4Q8WWG1 115 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 CNOT9Q92600 299 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 DHRS1Q96LJ7 313 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 TBL1XR1Q9BZK7 514 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 RTN4RQ9BZR6 473 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.64□□□□□ -0.23
NFIX-208ENST00000587260 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ZZEF1O43149 2961 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 H3BNH8 94 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 FFAR1O14842 300 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 PEX1O43933 1283 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 BCAS1O75363 584 aaPredicted RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 SLC25A12O75746 678 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 NEURL1O76050 574 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 CSTAP01040 98 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 PDGFAP04085 211 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 SESN3P58005 492 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 CD226Q15762 336 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ZNF550Q7Z398 422 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 MARCH3Q86UD3 253 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 CYP4Z1Q86W10 505 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 MISPQ8IVT2 679 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 ZNF440Q8IYI8 595 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 NTNG2Q96CW9 530 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 NRBF2Q96F24 287 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 OSBPL11Q9BXB4 747 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 HES7Q9BYE0 225 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 SH2D2AQ9NP31 389 aa13.64□□□□□ -0.23
NFIX-208ENST00000587260 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 PCDHGA9Q9Y5G4 932 aaKnown RBP13.64□□□□□ -0.23
NFIX-208ENST00000587260 A0A0G2JMM0 328 aa13.63□□□□□ -0.23
NFIX-208ENST00000587260 A0A1W2PPB8 328 aa13.63□□□□□ -0.23
NFIX-208ENST00000587260 A0A1W2PRS3 328 aa13.63□□□□□ -0.23
NFIX-208ENST00000587260 KIR3DP1A8MWS1 328 aa13.63□□□□□ -0.23
NFIX-208ENST00000587260 J3KTA2 159 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms