RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 IMPG1Q17R60 797 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CLEC12BQ2HXU8 276 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CPTPQ5TA50 214 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 HBMQ6B0K9 141 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CLEC6AQ6EIG7 209 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 TRIM46Q7Z4K8 759 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 WDR75Q8IWA0 830 aaKnown RBP10.36□□□□□ -0.75
LIG3-207ENST00000586119 HOMEZQ8IX15 550 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 GTPBP8Q8N3Z3 284 aaPredicted RBP10.36□□□□□ -0.75
LIG3-207ENST00000586119 CCDC63Q8NA47 563 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 SLC16A11Q8NCK7 471 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 NUP43Q8NFH3 380 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 FAM110BQ8TC76 370 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 ABHD3Q8WU67 409 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 ARL8AQ96BM9 186 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 SRXN1Q9BYN0 137 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 KCNK9Q9NPC2 374 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 BAIAP2L1Q9UHR4 511 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 MRTO4Q9UKD2 239 aaKnown RBP10.36□□□□□ -0.75
LIG3-207ENST00000586119 STK38LQ9Y2H1 464 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 ATRQ13535 2644 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 NPIPA5A0A0B4J1W7 369 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 NPIPA7E9PJI5 369 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 H3BQF6 201 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 OVOL3O00110 214 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 BIRC5O15392 142 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 CLOCKO15516 846 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 SEC22BO75396 215 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 GCM2O75603 506 aaPredicted RBP10.35□□□□□ -0.75
LIG3-207ENST00000586119 KCNH1O95259 989 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 SYNGR4O95473 234 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 DANCRP0C864 163 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 NPIPA8P0DM63 369 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 FCGR2AP12318 317 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 CREB1P16220 341 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 PPP3CBP16298 524 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 AGTR1P30556 359 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 GPC1P35052 558 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 SFTPDP35247 375 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 ETV4P43268 484 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 GSTM5P46439 218 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 PRIM2P49643 509 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 PSMD4P55036 377 aaKnown RBP10.35□□□□□ -0.75
LIG3-207ENST00000586119 LIPMQ5VYY2 423 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 Q6ZSR9 355 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 BEND4Q6ZU67 534 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 TUSC5Q8IXB3 177 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 ATP6V1C2Q8NEY4 427 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 OR2T11Q8NH01 316 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 REPIN1Q9BWE0 567 aaKnown RBP10.35□□□□□ -0.75
LIG3-207ENST00000586119 CXorf56Q9H5V9 222 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 OXSMQ9NWU1 459 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 NKIRAS1Q9NYS0 192 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
LIG3-207ENST00000586119 GPR52Q9Y2T5 361 aa10.35□□□□□ -0.75
LIG3-207ENST00000586119 TMEM120BA0PK00 339 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 C9JVG2 144 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TRIM13O60858 407 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 SLITRK5O94991 958 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ADAP00813 363 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 LINGO3P0C6S8 592 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 DHRS4L1P0CG22 281 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ZNF17P17021 662 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 PSMB1P20618 241 aaKnown RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 EDNRAP25101 427 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ACVR1BP36896 505 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 SERPINB5P36952 375 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 CARD18P57730 90 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 RPS4XP62701 263 aaKnown RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 FOXF1Q12946 379 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 VEZF1Q14119 521 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TAB1Q15750 504 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TOMM34Q15785 309 aaPredicted RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 NDUFAF6Q330K2 333 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 RFTN2Q52LD8 501 aaPredicted RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 HSP90B2PQ58FF3 399 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TTMPQ5BVD1 217 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 NCMAPQ5T1S8 102 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 CBLN3Q6UW01 205 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TFAP2EQ6VUC0 442 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ESPNLQ6ZVH7 1005 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 SZRD1Q7Z422 152 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 LILRA2Q8N149 483 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 GABRG1Q8N1C3 465 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 SPATA3Q8NHX4 192 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 ZNF775Q96BV0 537 aaPredicted RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 TSSK3Q96PN8 268 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 REG4Q9BYZ8 158 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 TUBB1Q9H4B7 451 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 C3orf14Q9HBI5 128 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 GIN1Q9NXP7 522 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 SH3BP4Q9P0V3 963 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 SLC17A7Q9P2U7 560 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms