RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 EGLN3Q9H6Z9 239 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 LANCL2Q9NS86 450 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 FBXO34Q9NWN3 711 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 DLL3Q9NYJ7 618 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 CNIH4Q9P003 139 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 KCNE5Q9UJ90 142 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 ZNF223Q9UK11 482 aaPredicted RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 CBLCQ9ULV8 474 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLC6A14Q9UN76 642 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 DIMT1Q9UNQ2 313 aaKnown RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLC35A3Q9Y2D2 325 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 NTNG1Q9Y2I2 539 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 EXOSC1Q9Y3B2 195 aaKnown RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 OR10H1Q9Y4A9 318 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 CLDN16Q9Y5I7 305 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 R4GN57 208 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 UNC13CQ8NB66 2214 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 FRYLO94915 3013 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NPIPA5A0A0B4J1W7 369 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 CENPVL1A0A0U1RR11 272 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NPIPA7E9PJI5 369 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NPIPB9F8W1W9 429 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 H3BMH7 237 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 CCRL2O00421 344 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 MYL12BO14950 172 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 POLR1CO15160 346 aaPredicted RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 CDC123O75794 336 aaPredicted RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 LYPD3O95274 346 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NPIPA8P0DM63 369 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 BMP7P18075 431 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 MAOAP21397 527 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 FBLP22087 321 aaKnown RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 NR4A1P22736 598 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 EPHA8P29322 1005 aaPredicted RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 RORAP35398 523 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 LIPAP38571 399 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 GCGRP47871 477 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 RGS6P49758 472 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 SEPHS1P49903 392 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 PGDP52209 483 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 DMWDQ09019 674 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 RAB40BQ12829 278 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 SQSTM1Q13501 440 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ERV3-1Q14264 604 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ZNF846Q147U1 533 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NR0B2Q15466 257 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 SYT16Q17RD7 645 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 C3orf38Q5JPI3 329 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 PDZK1Q5T2W1 519 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 NPSR1Q6W5P4 371 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 GDPGP1Q6ZNW5 385 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 TTLL10Q6ZVT0 673 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 TMPRSS11FQ6ZWK6 438 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 LSMEM1Q8N8F7 131 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ZNF615Q8N8J6 731 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 RCBTB1Q8NDN9 531 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 OR8D4Q8NGM9 314 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 C16orf52Q8NHV5 167 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 DYNC2LI1Q8TCX1 351 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 FGF11Q92914 225 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 LRR1Q96L50 414 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 MGLLQ99685 303 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 YIPF2Q9BWQ6 316 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 PLA2G12AQ9BZM1 189 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 WDR12Q9GZL7 423 aaKnown RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 DSN1Q9H410 356 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ZNF768Q9H5H4 540 aaKnown RBP10.41□□□□□ -0.74
LIG3-204ENST00000585740 CAPN10Q9HC96 672 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 RPS6KB2Q9UBS0 482 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 BAIAP2Q9UQB8 552 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 PCDHGA3Q9Y5H0 932 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 A3GALT2U3KPV4 340 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 CACNA1EQ15878 2313 aa10.41□□□□□ -0.74
LIG3-204ENST00000585740 A0A0B4J2E0 115 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 A0A1B0GTQ1 180 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 A0A1B0GX12 115 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 C17orf105B2RV13 164 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 TMX2-CTNND1H3BSU7 103 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 SURF4O15260 269 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 PIP5K1CO60331 668 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 HCN1O60741 890 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 NADKO95544 446 aaPredicted RBP10.4□□□□□ -0.74
LIG3-204ENST00000585740 SCG5P05408 212 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 INHBBP09529 407 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 GKN3PP0CG01 181 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 GIMD1P0DJR0 217 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 CT45A8P0DMV1 189 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 CT45A9P0DMV2 189 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 IFI30P13284 250 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 PRG2P13727 222 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 MYL12AP19105 171 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 ALAS2P22557 587 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 CSF2RBP32927 897 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 ADH7P40394 386 aa10.4□□□□□ -0.74
LIG3-204ENST00000585740 PPICP45877 212 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms