RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 GJE1A6NN92 205 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 EVPLLA8MZ36 301 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 H0Y3Z8 333 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 CLIC1O00299 241 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ETV2O00321 342 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 HCRTR2O43614 444 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ZIC3O60481 467 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 UGT2B17O75795 530 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 DBIP07108 87 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 NR2F1P10589 423 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 HOXB9P17482 250 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 POU3F2P20265 443 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ME2P23368 584 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PEX19P40855 299 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 CRATP43155 626 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 MVDP53602 400 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 CASP9P55211 416 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 GPR68Q15743 365 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 TMEM44Q2T9K0 475 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 OR5M10Q6IEU7 315 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 FRRS1Q6ZNA5 592 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 CHMP1BQ7LBR1 199 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ZAR1Q86SH2 424 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PEX5LQ8IYB4 626 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF440Q8IYI8 595 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 TMEM234Q8WY98 164 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ST8SIA1Q92185 356 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC35B4Q969S0 331 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 LRRC46Q96FV0 321 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 MRGPRX4Q96LA9 322 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 TM9SF2Q99805 663 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 MED17Q9NVC6 651 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 ARMCX1Q9P291 453 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC6A5Q9Y345 797 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 PCDHB14Q9Y5E9 798 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
PRKCSH-202ENST00000585540 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 CCDC22O60826 627 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 DNAJA2O60884 412 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 H6PDO95479 791 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 IL18BPO95998 194 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 CSTAP01040 98 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 IL2RAP01589 272 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 THBS1P07996 1170 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SNRPB2P08579 225 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 FCGR2AP12318 317 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 UQCRBP14927 111 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 PGCP20142 388 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 RPS4Y1P22090 263 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 LHX2P50458 406 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 B3GALT5-AS1P59052 145 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF117Q03924 483 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 FUT5Q11128 374 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 KLF10Q13118 480 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 RGNQ15493 299 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 CD226Q15762 336 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 PLPPR5Q32ZL2 321 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC25A35Q3KQZ1 300 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 PDZK1Q5T2W1 519 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ADGRE4PQ86SQ3 457 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 FAM71CQ8NEG0 241 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 OR5W2Q8NH69 310 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 BBS10Q8TAM1 723 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 CA5BP1Q8WTZ4 195 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 RAB8BQ92930 207 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 AURKBQ96GD4 344 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC38A1Q9H2H9 487 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 EVA1AQ9H8M9 152 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 BCL2L10Q9HD36 194 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 SLAMF8Q9P0V8 285 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 MKLN1Q9UL63 735 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ICAM5Q9UMF0 924 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 IFT52Q9Y366 437 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 L3MBTL1Q9Y468 752 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF175Q9Y473 711 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 ARHGAP21Q5T5U3 1957 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms