RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PGGHGQ32M88 737 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ZNF672Q499Z4 452 aaPredicted RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 TMEM201Q5SNT2 666 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 TRMT10CQ7L0Y3 403 aaKnown RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 HIPK1Q86Z02 1210 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ABHD3Q8WU67 409 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 NEUROG1Q92886 237 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 FBXW5Q969U6 566 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 SH3YL1Q96HL8 342 aaPredicted RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 GRIP2Q9C0E4 1043 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ESRP2Q9H6T0 727 aaKnown RBP12.86□□□□□ -0.35
SDF2-202ENST00000585428 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 C1orf109Q9NX04 203 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 GIN1Q9NXP7 522 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 KLHL13Q9P2N7 655 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 LIPT1Q9Y234 373 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ROS1P08922 2347 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 TLN2Q9Y4G6 2542 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 SLC28A1O00337 649 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 SCDO00767 359 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 TLX2O43763 284 aaPredicted RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 HSPA4LO95757 839 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ADAP00813 363 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 PROCP04070 461 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 CD3EP07766 207 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ALOX5P09917 674 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 MYL2P10916 166 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 HPGDP15428 266 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ACVR1BP36896 505 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 DMTNQ08495 405 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ITGADQ13349 1161 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 VEZF1Q14119 521 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 MLC1Q15049 377 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 RFTN2Q52LD8 501 aaPredicted RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 CCNJQ5T5M9 372 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ZNF524Q96C55 264 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 PPCDCQ96CD2 204 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 REXO5Q96IC2 774 aaKnown RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 MS4A4EQ96PG1 132 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 CCT7Q99832 543 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 BTBD2Q9BX70 525 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 TRIM2Q9C040 744 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 LRTM1Q9HBL6 345 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 NGBQ9NPG2 151 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 SH3BP4Q9P0V3 963 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 BAIAP2L1Q9UHR4 511 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 ING1Q9UK53 422 aaPredicted RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 MAGED1Q9Y5V3 778 aaPredicted RBP12.85□□□□□ -0.35
SDF2-202ENST00000585428 ACTL7BQ9Y614 415 aa12.85□□□□□ -0.35
SDF2-202ENST00000585428 CLOCKO15516 846 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 AKAP10O43572 662 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 CD5LO43866 347 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 IGHV4-39P01824 125 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 SDC1P18827 310 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 ELK4P28324 431 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 SFTPDP35247 375 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 CDKN1AP38936 164 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 ZNF117Q03924 483 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
SDF2-202ENST00000585428 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 CBLN3Q6UW01 205 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 RNF165Q6ZSG1 346 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 FCRLAQ7L513 359 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 FBXO27Q8NI29 283 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 GPR119Q8TDV5 335 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 STACQ99469 402 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 TXLNGYQ9BZA5 131 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 TUBB1Q9H4B7 451 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 DUSP22Q9NRW4 184 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
SDF2-202ENST00000585428 PTGDR2Q9Y5Y4 395 aa12.84□□□□□ -0.35
SDF2-202ENST00000585428 CUBNO60494 3623 aa12.83□□□□□ -0.35
SDF2-202ENST00000585428 OIP5O43482 229 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 RGS14O43566 566 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 PLIN3O60664 434 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 NDUFS7O75251 213 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 CRCPO75575 148 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms