RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TESQ9UGI8 421 aaKnown RBP9.6□□□□□ -0.87
LIG3-203ENST00000585370 NXT1Q9UKK6 140 aaKnown RBP9.6□□□□□ -0.87
LIG3-203ENST00000585370 MKL2Q9ULH7 1088 aa9.6□□□□□ -0.87
LIG3-203ENST00000585370 CHST2Q9Y4C5 530 aa9.6□□□□□ -0.87
LIG3-203ENST00000585370 HTR3EA5X5Y0 456 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 VSTM2BA6NLU5 285 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 NPIPB9F8W1W9 429 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 TO15178 435 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 CPNE3O75131 537 aaKnown RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 TNFSF15O95150 251 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 IL33O95760 270 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 DDAH2O95865 285 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 CLPSP04118 112 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 HEXBP07686 556 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ZGLP1P0C6A0 271 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ATP6V1B1P15313 513 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ADH7P40394 386 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ALDH3B2P48448 385 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 MAD2L1BPQ15013 274 aaPredicted RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 MEP1AQ16819 746 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 VWA2Q5GFL6 755 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 MRPL2Q5T653 305 aaKnown RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 PRAMEF17Q5VTA0 474 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 PWWP2BQ6NUJ5 590 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 PGBD2Q6P3X8 592 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ZNF613Q6PF04 617 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ZNF773Q6PK81 442 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 KLHL17Q6TDP4 642 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 COX15Q7KZN9 410 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 SLC29A4Q7RTT9 530 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 COMTD1Q86VU5 262 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 BCORP1Q8N888 145 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ZNF527Q8NB42 609 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 OR4K5Q8NGD3 323 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 OR9Q2Q8NGE9 314 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 OR1N1Q8NGS0 311 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 PIGXQ8TBF5 258 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 SLC2A12Q8TD20 617 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 DOK4Q8TEW6 326 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 ZNF721Q8TF20 911 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 TRUB1Q8WWH5 349 aaKnown RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 METTL21AQ8WXB1 218 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 TTC9Q92623 222 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 DGCR14Q96DF8 476 aaKnown RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 HSPBAP1Q96EW2 488 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 WBP1Q96G27 269 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 SLC41A3Q96GZ6 507 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 CCNL2Q96S94 520 aaPredicted RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 NIPSNAP1Q9BPW8 284 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 TUBA1CQ9BQE3 449 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 WFDC6Q9BQY6 131 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 TRIM2Q9C040 744 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 UBQLN4Q9NRR5 601 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 MAN2C1Q9NTJ4 1040 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 PLCXD1Q9NUJ7 323 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 RYDENQ9NUL5 291 aaKnown RBP9.59□□□□□ -0.87
LIG3-203ENST00000585370 RLIMQ9NVW2 624 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 SLC35A3Q9Y2D2 325 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 COL12A1Q99715 3063 aa9.59□□□□□ -0.87
LIG3-203ENST00000585370 A0A087WUU8 490 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 C2orf92A0A1B0GVN3 265 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ZAR1LA6NP61 321 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 EFCAB7A8K855 629 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 B4E171 279 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 HRKO00198 91 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 EFSO43281 561 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ABCB7O75027 752 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ANGPTL1O95841 491 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 KLK3P07288 261 aaPredicted RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 CYP4B1P13584 511 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 JUNBP17275 347 aaPredicted RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 EEF1B2P24534 225 aaKnown RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 ELK4P28324 431 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 CCKBRP32239 447 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 KRT20P35900 424 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 TSPAN7P41732 249 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 STAT5AP42229 794 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ZNF136P52737 540 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 EMP2P54851 167 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 TSPAN31Q12999 210 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 CLN3Q13286 438 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 LY6DQ14210 128 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 FGFBP1Q14512 234 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 PTGES3Q15185 160 aaKnown RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 SEC23BQ15437 767 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 MAPK14Q16539 360 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ZNF385CQ66K41 422 aaPredicted RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 NPSR1Q6W5P4 371 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ZNF730Q6ZMV8 503 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 GDF7Q7Z4P5 450 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 B3GNT8Q7Z7M8 397 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 P3H2Q8IVL5 708 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 CDK20Q8IZL9 346 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 LSMEM1Q8N8F7 131 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 RHOXF1Q8NHV9 184 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 WDR36Q8NI36 951 aaKnown RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 TSLPQ969D9 159 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 GTPBP3Q969Y2 492 aaKnown RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 ADIPOR1Q96A54 375 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms