RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ACOT7O00154 380 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 NME2P1O60361 137 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 CBR3O75828 277 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 SP1P08047 785 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 LINGO3P0C6S8 592 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 RHCEP18577 417 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 NME2P22392 152 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 FKBP2P26885 142 aaKnown RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ITPKBP27987 946 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 TNFSF10P50591 281 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF41P51814 821 aaPredicted RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 MAP2K6P52564 334 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ARHGDIAP52565 204 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 CCNIQ14094 377 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 MAPK14Q16539 360 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 CARM1Q86X55 608 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ZDHHC21Q8IVQ6 265 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 MDS2Q8NDY4 140 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 OR1J4Q8NGS1 313 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 OR5W2Q8NH69 310 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 DNAJA4Q8WW22 397 aaPredicted RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ST8SIA1Q92185 356 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ARSGQ96EG1 525 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ANKRD19PQ9H560 264 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 DCLRE1BQ9H816 532 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 QPCTLQ9NXS2 382 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 ZZEF1O43149 2961 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 USP24Q9UPU5 2620 aa11.83□□□□□ -0.52
TRIM47-202ENST00000585333 AKAP13Q12802 2813 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 NPIPA5A0A0B4J1W7 369 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 HTR3EA5X5Y0 456 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 NPIPA7E9PJI5 369 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 MASP2O00187 686 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 SNPHO15079 494 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF354AO60765 605 aaPredicted RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CYP7B1O75881 506 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 KRT36O76013 467 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 NEURL1O76050 574 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 NUDT14O95848 222 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 NPIPA8P0DM63 369 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CCL3P10147 92 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 FASP25445 335 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 EIF1P41567 113 aaKnown RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 MAGEA2P43356 314 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CCR4P51679 360 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CRYBA2P53672 197 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 KCNAB2Q13303 367 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 SKP2Q13309 424 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 RAPSNQ13702 412 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 GLYR1Q49A26 553 aaPredicted RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF766Q5HY98 468 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 WBP2NLQ6ICG8 309 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF613Q6PF04 617 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 MARCH3Q86UD3 253 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 PLCZ1Q86YW0 608 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ADGRG5Q8IZF4 528 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 LINC00471Q8N535 108 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 LSMEM1Q8N8F7 131 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 PIK3C3Q8NEB9 887 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF563Q8TA94 476 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 C9orf43Q8TAL5 461 aaPredicted RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CANT1Q8WVQ1 401 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 ZG16BQ96DA0 208 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 PRRC1Q96M27 445 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 BDH2Q9BUT1 245 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 RASSF4Q9H2L5 321 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 C12orf10Q9HB07 376 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 KRCC1Q9NPI7 259 aaPredicted RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 SPIN1Q9Y657 262 aaPredicted RBP11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CPAMD8Q8IZJ3 1885 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 IGF2RP11717 2491 aa11.82□□□□□ -0.52
TRIM47-202ENST00000585333 CACNA1BQ00975 2339 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 PCSK5Q92824 1860 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 FREM2Q5SZK8 3169 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 LINC01387J3KSC0 135 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 TAF4O00268 1085 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 GNGT2O14610 69 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 MAN1A2O60476 641 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 CDC40O60508 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 OR5F1O95221 314 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 PNMTP11086 282 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ADH6P28332 368 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 GAS1P54826 345 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 DSCR4P56555 118 aaPredicted RBP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 TAS2R41P59536 307 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ST3GAL3Q11203 375 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 EPS8Q12929 822 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 RIPK1Q13546 671 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms