RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TGM3Q08188 693 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRKAA1Q13131 559 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PPP1R7Q15435 360 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZSWIM7Q19AV6 140 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 BCL7AQ4VC05 210 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PIK3CD-AS1Q5SR53 167 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C22orf39Q6P5X5 142 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS55Q6UWB4 352 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 IRF2BP2Q7Z5L9 587 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZER1Q7Z7L7 766 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ADAMTSL2Q86TH1 951 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DEFB106AQ8N104 65 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC34A3Q8N130 599 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NRACQ8N912 160 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACVR1CQ8NER5 493 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DMBX1Q8NFW5 382 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 KBTBD8Q8NFY9 601 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 THAP6Q8TBB0 222 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TFB1MQ8WVM0 346 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HAS2Q92819 552 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ITFG2Q969R8 447 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NCLNQ969V3 563 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ECHDC3Q96DC8 303 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC126Q96EE4 140 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 QKIQ96PU8 341 aaKnown RBP eCLIP1.75□□□□□ -2.134e-7■■■■□ 21.4
SMCHD1-211ENST00000584897 IL12RB2Q99665 862 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 COQ7Q99807 217 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OMDQ99983 421 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SDCBP2Q9H190 292 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 P2RY12Q9H244 342 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHL31Q9H511 634 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACTR8Q9H981 624 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ELL3Q9HB65 397 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NMRK1Q9NWW6 199 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PLEK2Q9NYT0 353 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MSRB1Q9NZV6 116 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SENP1Q9P0U3 644 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MTRF1LQ9UGC7 380 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 AGO1Q9UL18 857 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 U3KQV3 271 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NYNRINQ9P2P1 1898 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 DNHD1Q96M86 4753 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TRAV24A0A0B4J272 114 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A1W2PR77 199 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8IPA6NC78 632 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HIDE1A8MVS5 230 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 F8VVB4 439 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 F8VWA3 439 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NPIPA3F8WFD2 350 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 H0Y8G0 127 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 KMOO15229 486 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC22A2O15244 555 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GRID2O43424 1007 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SPOPO43791 374 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 LRCH4O75427 683 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TM7SF2O76062 418 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PIGNO95427 931 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 IL4RP24394 825 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ADORA2BP29275 332 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CHI3L1P36222 383 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TSFMP43897 325 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PCYT1AP49585 367 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 VEGFCP49767 419 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NOVA1P51513 510 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RPP38P78345 283 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CSTF1Q05048 431 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CUL1Q13616 776 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PKP1Q13835 747 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GTF2H2Q13888 395 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NPTX1Q15818 432 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PDK4Q16654 411 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HFEQ30201 348 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GPAT3Q53EU6 434 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PHLDA2Q53GA4 152 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 LBHQ53QV2 105 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PRAMEF7Q5VXH5 474 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SULT1C3Q6IMI6 304 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHL10Q6JEL2 608 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TRNP1Q6NT89 227 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC25A24Q6NUK1 477 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GTF2H2CQ6P1K8 395 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CD164L2Q6UWJ8 174 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SPNS3Q6ZMD2 512 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF66Q6ZN08 573 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CREB3L2Q70SY1 520 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ADIPOR2Q86V24 386 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RASGEF1AQ8N9B8 481 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RXFP2Q8WXD0 754 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 STARD8Q92502 1023 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 LMLNQ96KR4 655 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SAMD8Q96LT4 415 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RPRD1AQ96P16 312 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR77Q9BQA1 342 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CRACR2AQ9BSW2 395 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 DDA1Q9BW61 102 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PITPNM3Q9BZ71 974 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 IL22Q9GZX6 179 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NT5DC2Q9H857 520 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 C10orf88Q9H8K7 445 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 APOBEC3GQ9HC16 384 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms