RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 OXSR1O95747 527 aaPredicted RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 SERPINA1P01009 418 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 FCGR1AP12314 374 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 DCTP40126 519 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 PTGDSP41222 190 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 ATP12AP54707 1039 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 SELENOWP63302 87 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 ALDH6A1Q02252 535 aaKnown RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 C19orf57Q0VDD7 668 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 FOXO1Q12778 655 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 MAPK11Q15759 364 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 HYAL4Q2M3T9 481 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 FAM98BQ52LJ0 330 aaKnown RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 PRR30Q53SZ7 412 aaPredicted RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 FKBP9P1Q75LS8 142 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 PRICKLE2Q7Z3G6 844 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 ARMC8Q8IUR7 673 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 OR4C3Q8NH37 302 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 FAR1Q8WVX9 515 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 NTNG2Q96CW9 530 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 DTNBP1Q96EV8 351 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 PYURFQ96I23 114 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 JSRP1Q96MG2 331 aaPredicted RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 CACYBPQ9HB71 228 aaKnown RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 GALNT9Q9HCQ5 603 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 S100A14Q9HCY8 104 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 FLRT3Q9NZU0 649 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 NTNG1Q9Y2I2 539 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 IFT52Q9Y366 437 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 GPC6Q9Y625 555 aaPredicted RBP14.17□□□□□ -0.14
SS18-216ENST00000580751 A0A1W2PQD3 144 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 PRAMEF27A3QJZ7 478 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 LRRC3CA6NJW4 275 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 NPIPB9F8W1W9 429 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 H3BNH8 94 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 M0QX08 132 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 TFECO14948 347 aaPredicted RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 HNRNPRO43390 633 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 FCMRO60667 390 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 GCM2O75603 506 aaPredicted RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 GLSO94925 669 aaPredicted RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 H6PDO95479 791 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 RAP2AP10114 183 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 ENDOUP21128 410 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 RFC3P40938 356 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 MLLT10P55197 1068 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 PPIAP62937 165 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 GPR68Q15743 365 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 SYPL1Q16563 259 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 CYBRD1Q53TN4 286 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 TIGD3Q6B0B8 471 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 TYW3Q6IPR3 259 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 FRRS1Q6ZNA5 592 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 MISPQ8IVT2 679 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 ADGRG5Q8IZF4 528 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 ZNF619Q8N2I2 560 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 ANKFN1Q8N957 763 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 NR4A3Q92570 626 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 BARD1Q99728 777 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 SLC38A1Q9H2H9 487 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 ASF1BQ9NVP2 202 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 PPP4R1LQ9P1A2 415 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 STX18Q9P2W9 335 aaKnown RBP14.16□□□□□ -0.14
SS18-216ENST00000580751 MKLN1Q9UL63 735 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 AP4S1Q9Y587 144 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 EML6Q6ZMW3 1958 aa14.16□□□□□ -0.14
SS18-216ENST00000580751 FAM166BA8MTA8 275 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 NDUFB5O43674 189 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 MFN2O95140 757 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 ANGPTL1O95841 491 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 THBS1P07996 1170 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 CHRM4P08173 479 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 GAS1P54826 345 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 CHRNB3Q05901 458 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 C17orf67Q0P5P2 114 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 LRRC23Q53EV4 343 aaPredicted RBP14.15□□□□□ -0.14
SS18-216ENST00000580751 ZNF324BQ6AW86 544 aaPredicted RBP14.15□□□□□ -0.14
SS18-216ENST00000580751 MARCH3Q86UD3 253 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 PEX5LQ8IYB4 626 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 FAM109AQ8N4B1 249 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 OR1J4Q8NGS1 313 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 CANT1Q8WVQ1 401 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 SLX1AQ9BQ83 275 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 ZNF703Q9H7S9 590 aaPredicted RBP14.15□□□□□ -0.14
SS18-216ENST00000580751 RNPEPL1Q9HAU8 725 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 QPCTLQ9NXS2 382 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
SS18-216ENST00000580751 PRDM4Q9UKN5 801 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 ZNF232Q9UNY5 417 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 C15orf41Q9Y2V0 281 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 DTNAQ9Y4J8 743 aa14.15□□□□□ -0.14
SS18-216ENST00000580751 NINQ8N4C6 2090 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 SVILO95425 2214 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 MYO18BQ8IUG5 2567 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 SYT5O00445 386 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 GNB5O14775 395 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 PRKD3O94806 890 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms