RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CCDC116Q8IYX3 515 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 TXLNBQ8N3L3 684 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 TCAIMQ8N3R3 496 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 SLC16A11Q8NCK7 471 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 NANPQ8TBE9 248 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 ZNF75CPQ92670 426 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 TMIGD2Q96BF3 282 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 MRPL1Q9BYD6 325 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 CD244Q9BZW8 370 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 PCDHA9Q9Y5H5 950 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 SOX21Q9Y651 276 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-213ENST00000580446 AKR1B15C9JRZ8 316 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 hCG_2039718K7EN88 272 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 PGAM1P18669 254 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 FPR2P25090 351 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 MAGEA3P43357 314 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 MAGEA6P43360 314 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 ZNF41P51814 821 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 LMO4P61968 165 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 PSG6Q00889 435 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 E2F2Q14209 437 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 CCNG2Q16589 344 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 TEDDM1Q5T9Z0 273 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 SULT1C3Q6IMI6 304 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 TRMT10BQ6PF06 316 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 C4orf22Q6V702 233 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 LRRC70Q7Z2Q7 622 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 IGDCC3Q8IVU1 814 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 CNTN4Q8IWV2 1026 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 CDK20Q8IZL9 346 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 OR52E4Q8NGH9 312 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 HES6Q96HZ4 224 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 BCO1Q9HAY6 547 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 PLAC1Q9HBJ0 212 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 OPN4Q9UHM6 478 aa12.16□□□□□ -0.46
CSNK1D-213ENST00000580446 IGLV3-32A0A0A0MS00 114 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 FAM95CA0A1B0GW59 222 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 GOLGA6L19H0YKK7 550 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 PLPP2O43688 288 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 MPZL1O95297 269 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 IGKV1D-16P01601 117 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 RNASE1P07998 156 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 ITGA5P08648 1049 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 ADRA2AP08913 450 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 MLNP12872 115 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 MTHFD2P13995 350 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 TCN1P20061 433 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 COL8A2P25067 703 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 C17orf67Q0P5P2 114 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 CPSF6Q16630 551 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 CCNYL2Q5T2Q4 361 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 OR7G2Q8NG99 324 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 NEU4Q8WWR8 484 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 CERS2Q96G23 380 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 ZNF681Q96N22 645 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 CITED1Q99966 193 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 RACGAP1Q9H0H5 632 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 SEC61A2Q9H9S3 476 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 CAB39LQ9H9S4 337 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 TIGARQ9NQ88 270 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 RNF14Q9UBS8 474 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 ZNF69Q9UC07 566 aa12.15□□□□□ -0.46
CSNK1D-213ENST00000580446 COL7A1Q02388 2944 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 A0A0G2JMP0 313 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 A0A0X1KG70 313 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 RGS14O43566 566 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 NTF4P34130 210 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 CLK3P49761 638 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 MAPK12P53778 367 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC18A2Q05940 514 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC9A3R2Q15599 337 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNF311Q5JNZ3 666 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 ARMC3Q5W041 872 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 DOK3Q7L591 496 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 GALNT5Q7Z7M9 940 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 TRABD2AQ86V40 505 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 JAZF1Q86VZ6 243 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 TEX9Q8N6V9 391 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 NOA1Q8NC60 698 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 OR4M2Q8NGB6 313 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 JADE3Q92613 823 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms