RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DTX4Q9Y2E6 619 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 LOC100653049A0A140TA62 436 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 NME6O75414 186 aaPredicted RBP17.5■□□□□ 0.39
LIMD2-209ENST00000580222 ERN1O75460 977 aaKnown RBP17.5■□□□□ 0.39
LIMD2-209ENST00000580222 KRT34O76011 436 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 KCNH1O95259 989 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 PSMG1O95456 288 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 COX4I1P13073 169 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 PRIM2P49643 509 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 CBX1P83916 185 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 ZNHIT3Q15649 155 aaPredicted RBP17.5■□□□□ 0.39
LIMD2-209ENST00000580222 EIPR1Q53HC9 387 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 REP15Q6BDI9 236 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 ANGPTL8Q6UXH0 198 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 TREML1Q86YW5 311 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 RP9Q8TA86 221 aaKnown RBP17.5■□□□□ 0.39
LIMD2-209ENST00000580222 FBXO30Q8TB52 745 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 JADE3Q92613 823 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 PIK3IP1Q96FE7 263 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 GNRHR2Q96P88 292 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 DOHHQ9BU89 302 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 UBQLN3Q9H347 655 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 CALHM2Q9HA72 323 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 NTMQ9P121 344 aa17.5■□□□□ 0.39
LIMD2-209ENST00000580222 CHD3Q12873 2000 aaKnown RBP17.5■□□□□ 0.39
LIMD2-209ENST00000580222 A0A096LPI6 279 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 MRASO14807 208 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 HPNP05981 417 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 FBXO45P0C2W1 286 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 LOXP28300 417 aaPredicted RBP17.49■□□□□ 0.39
LIMD2-209ENST00000580222 FAM27E3Q08E93 113 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 STX5Q13190 355 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 TNK1Q13470 666 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 NFYCQ13952 458 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 LASP1Q14847 261 aaKnown RBP17.49■□□□□ 0.39
LIMD2-209ENST00000580222 NNATQ16517 81 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 GTDC1Q4AE62 458 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 MFSD12Q6NUT3 480 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 DHDDSQ86SQ9 333 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 PM20D2Q8IYS1 436 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 SLC22A8Q8TCC7 542 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 TMEM158Q8WZ71 300 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 VSTM2LQ96N03 204 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 PAIP1Q9H074 479 aaKnown RBP17.49■□□□□ 0.39
LIMD2-209ENST00000580222 KLHL28Q9NXS3 571 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 CNIH4Q9P003 139 aa17.49■□□□□ 0.39
LIMD2-209ENST00000580222 FAF1Q9UNN5 650 aaPredicted RBP17.49■□□□□ 0.39
LIMD2-209ENST00000580222 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 A8MXE2 369 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 SNPHO15079 494 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 HMGN2P05204 90 aaKnown RBP17.48■□□□□ 0.39
LIMD2-209ENST00000580222 KRT16P08779 473 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 ZCCHC18P0CG32 403 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 FPR1P21462 350 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 PRDX6P30041 224 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 CPA2P48052 419 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 COQ5Q5HYK3 327 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 NHSL2Q5HYW2 709 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 LRIF1Q5T3J3 769 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 SAXO2Q658L1 398 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 HEPHL1Q6MZM0 1159 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 C6orf120Q7Z4R8 191 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 RETREG3Q86VR2 466 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 ZNF441Q8N8Z8 693 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 CDRT4Q8N9R6 151 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 SLC9A6Q92581 669 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 ADIPOR1Q96A54 375 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 INTS12Q96CB8 462 aaKnown RBP17.48■□□□□ 0.39
LIMD2-209ENST00000580222 CMTM5Q96DZ9 223 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 GIMAP5Q96F15 307 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 LCORQ96JN0 433 aaPredicted RBP17.48■□□□□ 0.39
LIMD2-209ENST00000580222 TUBA1CQ9BQE3 449 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 NXF5Q9H1B4 397 aaKnown RBP17.48■□□□□ 0.39
LIMD2-209ENST00000580222 SLC6A13Q9NSD5 602 aa17.48■□□□□ 0.39
LIMD2-209ENST00000580222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.48■□□□□ 0.39
LIMD2-209ENST00000580222 FRG2CA6NGY1 282 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 TTC36A6NLP5 189 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 CAPN14A8MX76 684 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 FBP2O00757 339 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 SOX30O94993 753 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 KRT75O95678 551 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 F12P00748 615 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 PPICP45877 212 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 WIPI1Q5MNZ9 446 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 FAM91A1Q658Y4 838 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 CDC73Q6P1J9 531 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 PODNL1Q6PEZ8 512 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 C22orf34Q6ZV56 151 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 SLC44A2Q8IWA5 706 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 GCNT2Q8N0V5 402 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 TAGAPQ8N103 731 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 DPP10Q8N608 796 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 PCYOX1LQ8NBM8 494 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 C17orf47Q8NEP4 570 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 PNPT1Q8TCS8 783 aaKnown RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 TP53INP1Q96A56 240 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 RCN3Q96D15 328 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 NEURL3Q96EH8 262 aa17.47■□□□□ 0.39
LIMD2-209ENST00000580222 OTUB1Q96FW1 271 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-209ENST00000580222 AURKBQ96GD4 344 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms