RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GAS1P54826 345 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PLAURQ03405 335 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 SKP2Q13309 424 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 RCN1Q15293 331 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 BORAQ6PGQ7 559 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 IGFL2Q6UWQ7 119 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 GATSQ8NAP1 163 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 OR6T1Q8NGN1 323 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 VANGL1Q8TAA9 524 aaPredicted RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 FRMD6Q96NE9 622 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 RNPEPL1Q9HAU8 725 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 NDUFAF4Q9P032 175 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 STX18Q9P2W9 335 aaKnown RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 PCDHGA9Q9Y5G4 932 aaKnown RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 WIF1Q9Y5W5 379 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 H0Y3Z8 333 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 hCG_2039718K7EN88 272 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 FAAHO00519 579 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 ADAM10O14672 748 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 TIPRLO75663 272 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 LDLRP01130 860 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 CCL3P10147 92 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 P2RX1P51575 399 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 ZNF136P52737 540 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 SUMO3P55854 103 aaPredicted RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 RAPSNQ13702 412 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 GK3PQ14409 553 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 OR1C1Q15619 314 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 NPTX1Q15818 432 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 ATP6AP1Q15904 470 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 IQCCQ4KMZ1 466 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 DEF8Q6ZN54 512 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 LACC1Q8IV20 430 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PQLC1Q8N2U9 271 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PSD4Q8NDX1 1056 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 OR4D11Q8NGI4 311 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 B4GALNT2Q8NHY0 566 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PHF10Q8WUB8 498 aaKnown RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 TM9SF4Q92544 642 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 NTNG2Q96CW9 530 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 MCHR1Q99705 422 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 SMAD5Q99717 465 aaKnown RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 ZNF559Q9BR84 538 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 TRIM2Q9C040 744 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 ANKRD10Q9NXR5 420 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 C6orf203Q9P0P8 240 aaPredicted RBP9.82□□□□□ -0.84
SS18-213ENST00000579640 PPP4R1LQ9P1A2 415 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 DNAJB9Q9UBS3 223 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 CARD8Q9Y2G2 431 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 PCDHGB7Q9Y5F8 929 aa9.82□□□□□ -0.84
SS18-213ENST00000579640 NINQ8N4C6 2090 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 TAF4O00268 1085 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ADAMDEC1O15204 470 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 CLOCKO15516 846 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 FRS3O43559 492 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 HCRTR2O43614 444 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 BCAS1O75363 584 aaPredicted RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 CYP7B1O75881 506 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 NEURL1O76050 574 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ATP6V1G2O95670 118 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 BAG2O95816 211 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 CST1P01037 141 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 MT-ND1P03886 318 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 GKN3PP0CG01 181 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ANPEPP15144 967 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ITPKBP27987 946 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ACAA2P42765 397 aaKnown RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 RNF144AP50876 292 aaPredicted RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 SMIM11AP58511 58 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 COPZ1P61923 177 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ARG2P78540 354 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ZNF117Q03924 483 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 EPS8Q12929 822 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 CBFBQ13951 182 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 OR2T5Q6IEZ7 315 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 TSEN54Q7Z6J9 526 aaKnown RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 PACS2Q86VP3 889 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ZNF227Q86WZ6 799 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 RBM45Q8IUH3 476 aaKnown RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 TMCO5AQ8N6Q1 288 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
SS18-213ENST00000579640 OR2T29Q8NH02 315 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 OR5W2Q8NH69 310 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 DUSP19Q8WTR2 217 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 LRTOMTQ8WZ04 291 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ARSGQ96EG1 525 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 TMEM41AQ96HV5 264 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 PIP5K1AQ99755 562 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 WFDC6Q9BQY6 131 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 BDH2Q9BUT1 245 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 RTN4RQ9BZR6 473 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 RASSF4Q9H2L5 321 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 TMEM27Q9HBJ8 222 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 GALNT9Q9HCQ5 603 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 AGPAT4Q9NRZ5 378 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ACAD8Q9UKU7 415 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 ICAM5Q9UMF0 924 aa9.81□□□□□ -0.84
SS18-213ENST00000579640 GNGT2O14610 69 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms