RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DCST2Q5T1A1 773 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CCNJQ5T5M9 372 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ABHD17BQ5VST6 288 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TYW3Q6IPR3 259 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NANOGP8Q6NSW7 305 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LRFN4Q6PJG9 635 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OPN5Q6U736 354 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 IL20RBQ6UXL0 311 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 HACD2Q6Y1H2 254 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 BNC2Q6ZN30 1099 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RTL4Q6ZR62 310 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC29A4Q7RTT9 530 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NUP54Q7Z3B4 507 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 GALNTL5Q7Z4T8 443 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 DHDDSQ86SQ9 333 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RNF130Q86XS8 419 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC44A2Q8IWA5 706 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZZZ3Q8IYH5 903 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 DND1Q8IYX4 353 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CYP4Z2PQ8N1L4 340 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ANKFN1Q8N957 763 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 WDSUB1Q8N9V3 476 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PSD4Q8NDX1 1056 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OR2M7Q8NG81 312 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OR52N2Q8NGI0 321 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OR5L2Q8NGL0 311 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OR4C3Q8NH37 302 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RP9Q8TA86 221 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC22A8Q8TCC7 542 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PNPT1Q8TCS8 783 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC38A5Q8WUX1 472 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 DIO2Q92813 273 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TMBIM1Q969X1 311 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TMEM125Q96AQ2 219 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 EFHD2Q96C19 240 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LRRC58Q96CX6 371 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZG16BQ96DA0 208 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TMEM41AQ96HV5 264 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ITCHQ96J02 903 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MAP6Q96JE9 813 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MAGED4Q96JG8 741 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC35G5Q96KT7 338 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RILPQ96NA2 401 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF583Q96ND8 569 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PANX1Q96RD7 426 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SECISBP2Q96T21 854 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PRPF18Q99633 342 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CGREF1Q99674 301 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NPAS1Q99742 590 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 UTP23Q9BRU9 249 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 YIPF4Q9BSR8 244 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 BTBD2Q9BX70 525 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PRDM14Q9GZV8 571 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 FAM107BQ9H098 131 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NSRP1Q9H0G5 558 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF703Q9H7S9 590 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 KAT8Q9H7Z6 458 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZDHHC11Q9H8X9 412 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NANOGQ9H9S0 305 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TPT1P8Q9HAU6 139 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 C3orf14Q9HBI5 128 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 GALNT9Q9HCQ5 603 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 BCL2L10Q9HD36 194 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 A4GALTQ9NPC4 353 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 EQTNQ9NQ60 294 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CMTM6Q9NX76 183 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TUBA8Q9NY65 449 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 STMN3Q9NZ72 180 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LUZP4Q9P127 313 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LRFN1Q9P244 771 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PRODH2Q9UF12 536 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LEF1Q9UJU2 399 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CBLCQ9ULV8 474 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 VPS4AQ9UN37 437 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CFL2Q9Y281 166 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 B3GNT3Q9Y2A9 372 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NDUFAF1Q9Y375 327 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LIPGQ9Y5X9 500 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CAPN7Q9Y6W3 813 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 FASNP49327 2511 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LRRK2Q5S007 2527 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 UTP20O75691 2785 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RAI1Q7Z5J4 1906 aaPredicted RBP3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 HRNRQ86YZ3 2850 aaPredicted RBP3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 SPTAN1Q13813 2472 aaKnown RBP3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 DOPEY2Q9Y3R5 2298 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 ALPK2Q86TB3 2170 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 NPIPA5A0A0B4J1W7 369 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 TRAV17A0A0B4J275 112 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 LOC100653049A0A140TA62 436 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 A0A1W2PQD3 144 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 CLEC18AA5D8T8 446 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 PRAMEF25A6NGN4 478 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 AGAP5A6NIR3 686 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 CLDN24A6NM45 220 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 NUDT19A8MXV4 375 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 ALG1L2C9J202 215 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 NPIPA7E9PJI5 369 aa3.44□□□□□ -1.86
SMARCE1-215ENST00000578995 G3V3Y1 287 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms