RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 MST1P26927 711 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 CAPGP40121 348 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 OR1E2P47887 323 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 MAN2A2P49641 1150 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 CASP6P55212 293 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 POU6F2P78424 691 aaPredicted RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 IGLV3-21P80748 117 aaPredicted RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 OCA2Q04671 838 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 RBPJQ06330 500 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 ZNF267Q14586 743 aaPredicted RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 SYT16Q17RD7 645 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 ARHGAP11BQ3KRB8 267 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 EIPR1Q53HC9 387 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 NHSL2Q5HYW2 709 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 HEPHL1Q6MZM0 1159 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 MTFR2Q6P444 385 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 CARM1Q86X55 608 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 SLC16A11Q8NCK7 471 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 OR52R1Q8NGF1 315 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 CDS1Q92903 461 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 GIMAP5Q96F15 307 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 OTUB1Q96FW1 271 aaPredicted RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 SLC35A4Q96G79 324 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 C7orf34Q96L11 122 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 CNPPD1Q9BV87 410 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 PINK1Q9BXM7 581 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 ANKRD60Q9BZ19 345 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 GABARAPL1Q9H0R8 117 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 EVA1AQ9H8M9 152 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 WDR54Q9H977 334 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 Q9N2J8 555 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 NDUFAF4Q9P032 175 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 PDP1Q9P0J1 537 aaPredicted RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 PRODH2Q9UF12 536 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 NXT1Q9UKK6 140 aaKnown RBP9.36□□□□□ -0.91
SS18-210ENST00000578700 WDR45Q9Y484 360 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 TESMINQ9Y4I5 508 aa9.36□□□□□ -0.91
SS18-210ENST00000578700 NCOA6Q14686 2063 aaPredicted RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 C7orf72A4D263 438 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 C19orf84I3L1E1 186 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 SYT5O00445 386 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 UGT2B11O75310 529 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 UGT2B17O75795 530 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 WISP2O76076 250 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 DIRAS1O95057 198 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 GADD45GO95257 159 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 MED26O95402 600 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CHRM4P08173 479 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 PABPC4LP0CB38 370 aaKnown RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 UBTFL6P0CB48 400 aaPredicted RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 ANXA8P13928 327 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 IL7RP16871 459 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CD247P20963 164 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 IGFBP5P24593 272 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 PRKAR1BP31321 381 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 GABRA3P34903 492 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CA7P43166 264 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 TNFSF10P50591 281 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 RPS6KA3P51812 740 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CRYBA2P53672 197 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 IST1P53990 364 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CDH12P55289 794 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 BTG2P78543 158 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 IL1RL1Q01638 556 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 EXOSC7Q15024 291 aaKnown RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 DUSP5Q16690 384 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 DUSP7Q16829 419 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 ZSWIM7Q19AV6 140 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 LIN52Q52LA3 116 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 DCST2Q5T1A1 773 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 XKRXQ6PP77 449 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 RPTNQ6XPR3 784 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 QSOX2Q6ZRP7 698 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 AMER2Q8N7J2 671 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 OR7G1Q8NGA0 311 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 OR52P1PQ8NH57 321 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 VANGL1Q8TAA9 524 aaPredicted RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 STT3BQ8TCJ2 826 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 GIPC3Q8TF64 312 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CTHRC1Q96CG8 243 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 G6PC3Q9BUM1 346 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 ANKRA2Q9H9E1 313 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 PNO1Q9NRX1 252 aaKnown RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 KRT84Q9NSB2 600 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 PNPLA3Q9NST1 481 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 C14orf105Q9NVL8 296 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
SS18-210ENST00000578700 CLCA3PQ9Y6N3 262 aa9.35□□□□□ -0.91
SS18-210ENST00000578700 CPAMD8Q8IZJ3 1885 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 C17orf105B2RV13 164 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 AP3D1O14617 1153 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 CCNB2O95067 398 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms