RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 PPP1R36Q96LQ0 422 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C3orf30Q96M34 536 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C7orf26Q96N11 449 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 POTEKPQ9BYX7 375 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CHODLQ9H9P2 273 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 BRF2Q9HAW0 419 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PAQR5Q9NXK6 330 aaPredicted RBP6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GIMAP2Q9UG22 337 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SLC12A4Q9UP95 1085 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 B3GALT5Q9Y2C3 310 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CCL27Q9Y4X3 112 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ASB4Q9Y574 426 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DNAJC15Q9Y5T4 150 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 A0A0A6YYD5 115 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GOLGA8QA0A0J9YX86 632 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 LOC100289279A0A1B0GTE1 492 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 A0A1W2PR48 441 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SERTM1A2A2V5 107 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SLC35F4A4IF30 521 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GOLGA8OA6NCC3 632 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GOLGA8NF8WBI6 632 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EDF1O60869 148 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EEDO75530 441 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PRKRAO75569 313 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 AQP8O94778 261 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SEMA3DO95025 777 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CHEK2O96017 543 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CT62P0C5K7 136 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 LINC00032P0C843 101 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 HSD3B1P14060 373 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 S1PR1P21453 382 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DRD5P21918 477 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PTX3P26022 381 aaPredicted RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 HSD3B2P26439 372 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 BSGP35613 385 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PPICP45877 212 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RPL14P50914 215 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RAP1GDS1P52306 607 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CDH11P55287 796 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 IRX1P78414 480 aaPredicted RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 BSPH1Q075Z2 132 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CSTF3Q12996 717 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CUL3Q13618 768 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 EFR3AQ14156 821 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TAB1Q15750 504 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 IMPG1Q17R60 797 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 XKR7Q5GH72 579 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RAET1LQ5VY80 246 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DESI1Q6ICB0 168 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FIGNL1Q6PIW4 674 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RNF165Q6ZSG1 346 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 Q6ZSR9 355 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 IL17RELQ6ZVW7 336 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TRIM46Q7Z4K8 759 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 WDR75Q8IWA0 830 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DDIASQ8IXT1 998 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF525Q8N782 197 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR4K17Q8NGC6 315 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PIWIL2Q8TC59 973 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NEUROG1Q92886 237 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 S100PBPQ96BU1 408 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MSI2Q96DH6 328 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 THOC1Q96FV9 657 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RADILQ96JH8 1075 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 COL21A1Q96P44 957 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SERPINI1Q99574 410 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CACNG6Q9BXT2 260 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF717Q9BY31 904 aaPredicted RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ITPAQ9BY32 194 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MRPL1Q9BYD6 325 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NUF2Q9BZD4 464 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CCDC134Q9H6E4 229 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DDX31Q9H8H2 851 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CISD1Q9NZ45 108 aaKnown RBP6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 AP4B1Q9Y6B7 739 aa6.38□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR2M5A3KFT3 312 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GLOD5A6NK44 160 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 VWC2LB2RUY7 222 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SHISA9B4DS77 424 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 B4DXG7 233 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 H0YC42 278 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 NDUFS8O00217 210 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SLC28A1O00337 649 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SDHDO14521 159 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ZNF195O14628 629 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 LSM1O15116 133 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SEC14L5O43304 696 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 TMPRSS11DO60235 418 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KIAA0513O60268 411 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GCM2O75603 506 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RSL1D1O76021 490 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SNUPNO95149 360 aaKnown RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PLGP00747 810 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 GBAP04062 536 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ATP1B1P05026 303 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FAM58BPP0C7Q3 252 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CPMP14384 443 aa6.37□□□□□ -1.39
CDK5RAP3-209ENST00000578663 IL32P24001 234 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms