RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZNF771Q7L3S4 317 aaPredicted RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 MISPQ8IVT2 679 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 CLIP4Q8N3C7 705 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 OR4K17Q8NGC6 315 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 DUSP19Q8WTR2 217 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 CNOT9Q92600 299 aaKnown RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 UTP4Q969X6 686 aaKnown RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 LRGUKQ96M69 825 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 PINK1Q9BXM7 581 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 MMADHCQ9H3L0 296 aaPredicted RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 ARMC7Q9H6L4 198 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 MED11Q9P086 117 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 BOKQ9UMX3 212 aaPredicted RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 POMPQ9Y244 141 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 SLC35A3Q9Y2D2 325 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 CDHR4A6H8M9 788 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 LRRC3CA6NJW4 275 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 ADAM10O14672 748 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 SNPHO15079 494 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 ZNF264O43296 627 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 SUV39H1O43463 412 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 TRIM3O75382 744 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 NUDT14O95848 222 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 TNFRSF1BP20333 461 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 CD247P20963 164 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 TCEA1P23193 301 aaKnown RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 PLAURQ03405 335 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 SKP2Q13309 424 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 FLOT2Q14254 428 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 DUSP7Q16829 419 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 C1orf146Q5VVC0 180 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 AP1ARQ63HQ0 302 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 LCN8Q6JVE9 175 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 CBLN3Q6UW01 205 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 VTCN1Q7Z7D3 282 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 COMTD1Q86VU5 262 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 FAM86B1Q8N7N1 296 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 TEX19Q8NA77 164 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 FAM98AQ8NCA5 519 aaKnown RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 BHLHE22Q8NFJ8 381 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 GPR32P1Q8NGA4 272 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 OR1J4Q8NGS1 313 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 B4GALNT2Q8NHY0 566 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 VANGL1Q8TAA9 524 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 RASSF5Q8WWW0 418 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 LZICQ8WZA0 190 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 PROX1Q92786 737 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 TMEM41AQ96HV5 264 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 RNF145Q96MT1 663 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 GNRHR2Q96P88 292 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 RSPO3Q9BXY4 272 aaPredicted RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 TRIM15Q9C019 465 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 DSN1Q9H410 356 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 GORASP2Q9H8Y8 452 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 ZFP64Q9NPA5 681 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 KLHL28Q9NXS3 571 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 DNAJB12Q9NXW2 375 aaKnown RBP11.07□□□□□ -0.64
IFT20-207ENST00000578547 RPS6KA6Q9UK32 745 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
IFT20-207ENST00000578547 M0R3H8 397 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 ACOT8O14734 319 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 CDC40O60508 579 aaKnown RBP eCLIP11.06□□□□□ -0.64
IFT20-207ENST00000578547 EIF4E2O60573 245 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 PRKD3O94806 890 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 RASAL1O95294 804 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 GKN3PP0CG01 181 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 NQO1P15559 274 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 ENDOUP21128 410 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 ELAVL4P26378 380 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 GDF1P27539 372 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 RYKP34925 604 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 KCNJ5P48544 419 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 RGS8P57771 180 aaPredicted RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 HOXC5Q00444 222 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 TOMM20Q15388 145 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 TIGD3Q6B0B8 471 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 ENPP6Q6UWR7 440 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 FKBP9P1Q75LS8 142 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 CBLL1Q75N03 491 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 SPATA24Q86W54 205 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 PLCZ1Q86YW0 608 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 EID3Q8N140 333 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 WDSUB1Q8N9V3 476 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 LSM14AQ8ND56 463 aaKnown RBP11.06□□□□□ -0.64
IFT20-207ENST00000578547 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 HSH2DQ96JZ2 352 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 KLHDC3Q9BQ90 382 aa11.06□□□□□ -0.64
IFT20-207ENST00000578547 TTTY12Q9BZ98 90 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms