RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 HMGN4O00479 90 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 NR5A2O00482 541 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 NDUFB5O43674 189 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 KIAA0513O60268 411 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 STX11O75558 287 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ACTL6AO96019 429 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 VIMP08670 466 aaKnown RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 NPIPA8P0DM63 369 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 OR12D1P0DN82 309 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 BMP7P18075 431 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 DPP4P27487 766 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ANXA11P50995 505 aaKnown RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ART1P52961 327 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 MVDP53602 400 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ATP12AP54707 1039 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 GFRA1P56159 465 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 CD226Q15762 336 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 FLYWCH1Q4VC44 716 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 KLHL26Q53HC5 615 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 DCST1Q5T197 706 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 FBXW10Q5XX13 1052 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 SLC2A7Q6PXP3 512 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 MTERF4Q7Z6M4 381 aaKnown RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 KIF18BQ86Y91 864 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 LIX1LQ8IVB5 337 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ZZZ3Q8IYH5 903 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF527Q8NB42 609 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 OR14L1PQ8NHC6 308 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 RAB8BQ92930 207 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ABTB1Q969K4 478 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ROPN1LQ96C74 230 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 C1GALT1C1Q96EU7 318 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF317Q96PQ6 595 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 TRIB1Q96RU8 372 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 POLDIP3Q9BY77 421 aaKnown RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 PAIP1Q9H074 479 aaKnown RBP11.56□□□□□ -0.56
CCDC57-211ENST00000578187 POLE3Q9NRF9 147 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 TAS2R10Q9NYW0 307 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 MED11Q9P086 117 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 KIAA1549Q9HCM3 1950 aa11.56□□□□□ -0.56
CCDC57-211ENST00000578187 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TACC2O95359 2948 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 A0A096LPI6 279 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 PRAMEF27A3QJZ7 478 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 SYT5O00445 386 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 ZIC3O60481 467 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 FCMRO60667 390 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 ANP32DO95626 131 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 KRT75O95678 551 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 HPGDP15428 266 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 NCF2P19878 526 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-211ENST00000578187 CHMP24386 653 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 OPRM1P35372 400 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 B3GALT5-AS1P59052 145 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TESK1Q15569 626 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 AGKQ53H12 422 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 COX20Q5RI15 118 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 C6orf10Q5SRN2 563 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 LRIF1Q5T3J3 769 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 NSUN5P2Q63ZY6 315 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TYW3Q6IPR3 259 aaKnown RBP11.55□□□□□ -0.56
CCDC57-211ENST00000578187 ENPP6Q6UWR7 440 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 GATSQ8NAP1 163 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TNIP2Q8NFZ5 429 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 PNPT1Q8TCS8 783 aaKnown RBP11.55□□□□□ -0.56
CCDC57-211ENST00000578187 XAGE5Q8WWM1 108 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 OIT3Q8WWZ8 545 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 NINJ1Q92982 152 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 RNASE6Q93091 150 aaKnown RBP11.55□□□□□ -0.56
CCDC57-211ENST00000578187 SAP130Q9H0E3 1048 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 CLEC4MQ9H2X3 399 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-211ENST00000578187 PTGES2Q9H7Z7 377 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TPT1P8Q9HAU6 139 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 DTNAQ9Y4J8 743 aa11.55□□□□□ -0.56
CCDC57-211ENST00000578187 TRBV5-3A0A0A0MS03 114 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 CENPVL1A0A0U1RR11 272 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 A0A1W2PP18 115 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 CTAG2O75638 210 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 UGT2B17O75795 530 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 HK1P19367 917 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 DNAJA1P31689 397 aaKnown RBP11.54□□□□□ -0.56
CCDC57-211ENST00000578187 CEACAM8P31997 349 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-211ENST00000578187 ARFIP2P53365 341 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 DLX5P56178 289 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 GPR68Q15743 365 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF141Q15928 474 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 TMEM44Q2T9K0 475 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 GLYR1Q49A26 553 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-211ENST00000578187 PAGE3Q5JUK9 113 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 AAGABQ6PD74 315 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 FRRS1Q6ZNA5 592 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 OLIG3Q7RTU3 272 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF619Q8N2I2 560 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms