RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 IL23AQ9NPF7 189 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 IKZF2Q9UKS7 526 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 V9GYH0 126 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 A0A1W2PPV9 198 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 B4DXG7 233 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 B3GALT2O43825 422 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 MSL3P1P0C860 447 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 LIMS3P0CW19 117 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 LIMS4P0CW20 117 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ZNF81P51508 661 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 PPP1CAP62136 330 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 RPA4Q13156 261 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 CRMP1Q14194 572 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
NDEL1-204ENST00000578172 MAPK14Q16539 360 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 HES5Q5TA89 166 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 LINGO2Q7L985 606 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ASPGQ86U10 573 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 NRROSQ86YC3 692 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
NDEL1-204ENST00000578172 CCDC32Q9BV29 185 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 PLA2G2FQ9BZM2 168 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 HRASLS2Q9NWW9 162 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 RIIAD1A6NNX1 92 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 POLR1CO15160 346 aaPredicted RBP12.73□□□□□ -0.37
NDEL1-204ENST00000578172 RDH16O75452 317 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 KDM4BO94953 1096 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 DDX6P26196 483 aaKnown RBP eCLIP12.73□□□□□ -0.373e-8■■■■■ 98.7
NDEL1-204ENST00000578172 E2F1Q01094 437 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ZNF33BQ06732 778 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 MINDY4Q4G0A6 757 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ZNF613Q6PF04 617 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 NOXA1Q86UR1 476 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 VWA5B2Q8N398 1253 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 KIAA1958Q8N8K9 716 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 LSM14AQ8ND56 463 aaKnown RBP12.73□□□□□ -0.37
NDEL1-204ENST00000578172 CHAC2Q8WUX2 184 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 POLDIP3Q9BY77 421 aaKnown RBP12.73□□□□□ -0.37
NDEL1-204ENST00000578172 SYNDIG1Q9H7V2 258 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ANKHQ9HCJ1 492 aa12.73□□□□□ -0.37
NDEL1-204ENST00000578172 ORC5O43913 435 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 DHFRP00374 187 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 GSTM3P21266 225 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 LGALS3BPQ08380 585 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 FUT5Q11128 374 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 LYPD8Q6UX82 237 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 GAL3ST4Q96RP7 486 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ORAI3Q9BRQ5 295 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 MAN2C1Q9NTJ4 1040 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 MEIS3P1A6NDR6 274 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 H7C1C5 153 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 IMPA2O14732 288 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 KLF8O95600 359 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 CTSEP14091 401 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ELK1P19419 428 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 TEAD1P28347 426 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 CCR6P51684 374 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 LCN6P62502 163 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 BNC1Q01954 994 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PGGHGQ32M88 737 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 GPR155Q7Z3F1 870 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ZNF431Q8TF32 576 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 RLN3Q8WXF3 142 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 TNFRSF13CQ96RJ3 184 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 DPCDQ9BVM2 203 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 AICDAQ9GZX7 198 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 UBQLN3Q9H347 655 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 NDUFB11Q9NX14 153 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 CDV3Q9UKY7 258 aaKnown RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ACSL5Q9ULC5 683 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 MAU2Q9Y6X3 613 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 C17orf113A0A1B0GUU1 675 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 TBXA2RP21731 343 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PBX2P40425 430 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 RNF165Q6ZSG1 346 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 FAM174AQ8TBP5 190 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 OSTF1Q92882 214 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ZNF707Q96C28 371 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PEX11GQ96HA9 241 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 ASB16Q96NS5 453 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 TMEM27Q9HBJ8 222 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SRA1Q9HD15 236 aaKnown RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 PLEKHB1Q9UF11 243 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 DIMT1Q9UNQ2 313 aaKnown RBP12.72□□□□□ -0.37
NDEL1-204ENST00000578172 COLEC10Q9Y6Z7 277 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SPACA6W5XKT8 324 aa12.72□□□□□ -0.37
NDEL1-204ENST00000578172 SDK2Q58EX2 2172 aa12.71□□□□□ -0.37
NDEL1-204ENST00000578172 FNDC1Q4ZHG4 1894 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms