RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SPG11Q96JI7 2443 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ZNF469Q96JG9 3925 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 EXOC1LA0A1B0GW35 172 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 GNG14A0A1W2PPG7 69 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 A0A1W2PPM1 405 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 C9orf118A6NHY6 69 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 OR6C70A6NIJ9 312 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 PRSS47A8MTI9 375 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 GMFGO60234 142 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 RCBTB2O95199 551 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 KRT6AP02538 564 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 RAF1P04049 648 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 HRGP04196 525 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 KRT6BP04259 564 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 JUNP05412 331 aaKnown RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 ANXA4P09525 319 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 ZNF708P17019 499 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TAC1P20366 129 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 IMPDH1P20839 514 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ATP5F1P24539 256 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 DPP4P27487 766 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 HMOX2P30519 316 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 SRD5A2P31213 254 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TIA1P31483 386 aaKnown RBP eCLIP5.61□□□□□ -1.51
NUP88-212ENST00000576708 GCKP35557 465 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 CPOXP36551 454 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ETV4P43268 484 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 CPA2P48052 419 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 KRT6CP48668 564 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 CLDN18P56856 261 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 DCAF7P61962 342 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TRA2BP62995 288 aaKnown RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 PSG6Q00889 435 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ACSM2AQ08AH3 577 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 FAM27E3Q08E93 113 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 C2orf80Q0P641 193 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ZNF155Q12901 538 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 CSTF3Q12996 717 aaKnown RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 STX5Q13190 355 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 SNTA1Q13424 505 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 KEAP1Q14145 624 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 RASA2Q15283 850 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 SF3B4Q15427 424 aaKnown RBP eCLIP5.61□□□□□ -1.512e-7■■■■□ 22.4
NUP88-212ENST00000576708 WHAMMP3Q1A5X7 153 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 DEFB113Q30KQ7 82 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 FAM153CQ494X1 144 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ACSM2BQ68CK6 577 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TMEM81Q6P7N7 255 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 VWA1Q6PCB0 445 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ENPP6Q6UWR7 440 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TIFABQ6ZNK6 161 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ADGRE4PQ86SQ3 457 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 IFNEQ86WN2 208 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 CCNYL1Q8N7R7 359 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 CHDHQ8NE62 594 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 ZNF675Q8TD23 568 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 FIG4Q92562 907 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TMCO6Q96DC7 493 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 MTBPQ96DY7 904 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 VSTM2LQ96N03 204 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 BTBD9Q96Q07 612 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ZNF382Q96SR6 550 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 SETD2Q9BYW2 2564 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 SHCBP1LQ9BZQ2 653 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 C12orf65Q9H3J6 166 aaKnown RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 DSN1Q9H410 356 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 GSTO2Q9H4Y5 243 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 SLC35C2Q9NQQ7 365 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 NMRK1Q9NWW6 199 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 MED11Q9P086 117 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 C6orf203Q9P0P8 240 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 CLCF1Q9UBD9 225 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 DKKL1Q9UK85 242 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 EMCNQ9ULC0 261 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 NFU1Q9UMS0 254 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 POLR3HQ9Y535 204 aaPredicted RBP5.61□□□□□ -1.51
NUP88-212ENST00000576708 ZFHX3Q15911 3703 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 ITPR3Q14573 2671 aa5.61□□□□□ -1.51
NUP88-212ENST00000576708 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 A0A1W2PNV4 684 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GXYLT2A0PJZ3 443 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 A8MXE2 369 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 MYO1GB0I1T2 1018 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 G3V2L1 256 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SEC14L5O43304 696 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 RIPK2O43353 540 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 FADS1O60427 444 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 CDH16O75309 829 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 TNFSF13O75888 250 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 BCAS2O75934 225 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 IGKV1D-16P01601 117 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 CELA3BP08861 270 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 INHBBP09529 407 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 HSD3B1P14060 373 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 HK1P19367 917 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 IL12BP29460 328 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 KRT20P35900 424 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 RFX3P48380 749 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 NCBP2P52298 156 aaKnown RBP eCLIP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms