RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PLIN3O60664 434 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CHEK2O96017 543 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 LINGO3P0C6S8 592 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 IL32P24001 234 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ADH6P28332 368 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CRHR1P34998 444 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 SFTPDP35247 375 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 HPCAL1P37235 193 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ASMTP46597 345 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CCT5P48643 541 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CARD18P57730 90 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 POU6F2P78424 691 aaPredicted RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 DMTNQ08495 405 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 FOXF1Q12946 379 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 VEZF1Q14119 521 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CD226Q15762 336 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CCNJQ5T5M9 372 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ALKBH2Q6NS38 261 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ADAM5Q6NVV9 412 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 TFAP2EQ6VUC0 442 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 R3HCC1LQ7Z5L2 792 aaKnown RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 MTERF4Q7Z6M4 381 aaKnown RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 GABRG1Q8N1C3 465 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ZNF527Q8NB42 609 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CLHC1Q8NHS4 586 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 POC1BQ8TC44 478 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ABHD3Q8WU67 409 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 OSTF1Q92882 214 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 FBXW5Q969U6 566 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 S100PBPQ96BU1 408 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 MTERF3Q96E29 417 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 OTUB1Q96FW1 271 aaPredicted RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 CHMP6Q96FZ7 201 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 STACQ99469 402 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 MDFIQ99750 246 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 BTBD2Q9BX70 525 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 HDHD5Q9BXW7 423 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ESRP2Q9H6T0 727 aaKnown RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 GP6Q9HCN6 339 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 DUSP22Q9NRW4 184 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 ZCCHC3Q9NUD5 404 aaKnown RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 MID2Q9UJV3 735 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 FIS1Q9Y3D6 152 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 H3BNH8 94 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 COPEO14579 308 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 LSM1O15116 133 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CLOCKO15516 846 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 GCM2O75603 506 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 SOX30O94993 753 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 NUDT14O95848 222 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 HMGN2P05204 90 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CD3EP07766 207 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 NID1P14543 1247 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CPA3P15088 417 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 ATP6V1C1P21283 382 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 SUMO3P55854 103 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 ZNF117Q03924 483 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 TNK1Q13470 666 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CAPRIN1Q14444 709 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 LASP1Q14847 261 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 MLC1Q15049 377 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CLEC12BQ2HXU8 276 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 RFTN2Q52LD8 501 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 SFRP5Q5T4F7 317 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 Q6ZSR9 355 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CXXC5Q7LFL8 322 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 TDRPQ86YL5 185 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 BANPQ8N9N5 519 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 OR2T11Q8NH01 316 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 RAB3IL1Q8TBN0 382 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 PHOSPHO1Q8TCT1 267 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 ROBO4Q8WZ75 1007 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 FAM120BQ96EK7 910 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 TRMT61AQ96FX7 289 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 C16orf58Q96GQ5 468 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 KLHDC3Q9BQ90 382 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 TRMOQ9BU70 441 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 SRXN1Q9BYN0 137 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 POTEKPQ9BYX7 375 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 TXLNGYQ9BZA5 131 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 FBXO34Q9NWN3 711 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 GIN1Q9NXP7 522 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 GPC6Q9Y625 555 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-208ENST00000575261 PRR14LQ5THK1 2151 aa9.3□□□□□ -0.92
TVP23B-208ENST00000575261 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
TVP23B-208ENST00000575261 TMEM114B3SHH9 223 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 OVOL3O00110 214 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 SCAMP2O15127 329 aaKnown RBP9.29□□□□□ -0.92
TVP23B-208ENST00000575261 CRLF1O75462 422 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 KRT16P08779 473 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 FAM153BP0C7A2 387 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 EFNA1P20827 205 aaPredicted RBP9.29□□□□□ -0.92
TVP23B-208ENST00000575261 SHC1P29353 583 aa9.29□□□□□ -0.92
TVP23B-208ENST00000575261 RPL3P39023 403 aaKnown RBP9.29□□□□□ -0.92
TVP23B-208ENST00000575261 P2RX1P51575 399 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms