RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 AGKQ53H12 422 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 TYW3Q6IPR3 259 aaKnown RBP18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 BLOC1S3Q6QNY0 202 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 CBLN3Q6UW01 205 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 CHMP1BQ7LBR1 199 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 FUNDC1Q8IVP5 155 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 MEIOBQ8N635 442 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 TMCO5AQ8N6Q1 288 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 GTF2H4Q92759 462 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 ZBTB8AQ96BR9 441 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 SPDL1Q96EA4 605 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 AURKBQ96GD4 344 aaPredicted RBP18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 TPT1P8Q9HAU6 139 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 KCNJ16Q9NPI9 418 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 TRIM33Q9UPN9 1127 aa18.71■□□□□ 0.59
HCFC1R1-208ENST00000575214 CENPVL1A0A0U1RR11 272 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 SERINC4A6NH21 518 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 CLCA1A8K7I4 914 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 ATP8B1O43520 1251 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 H6PDO95479 791 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 TROVE2P10155 538 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 ZNF17P17021 662 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 P2RX1P51575 399 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 GUCY1A3Q02108 690 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 SYPL1Q16563 259 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 FRRS1Q6ZNA5 592 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 ZNF619Q8N2I2 560 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 NAXEQ8NCW5 288 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 KLHDC3Q9BQ90 382 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 RABEP2Q9H5N1 569 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 KCNE5Q9UJ90 142 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 LIPT1Q9Y234 373 aa18.7■□□□□ 0.58
HCFC1R1-208ENST00000575214 PRAMEF27A3QJZ7 478 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 MBD3L4A6NDZ8 208 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 MBD3L3A6NE82 208 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 MBD3L5A6NJ08 208 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 C19orf84I3L1E1 186 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 ZNF264O43296 627 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 CYP7B1O75881 506 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 GUSBP08236 651 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 VIMP08670 466 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 NR2F1P10589 423 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 CEACAM8P31997 349 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 CRATP43155 626 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 CCR4P51679 360 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 SUMO3P55854 103 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 TMEM44Q2T9K0 475 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 PLXDC2Q6UX71 529 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 LIX1LQ8IVB5 337 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 GTPBP8Q8N3Z3 284 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 ANKFN1Q8N957 763 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 MBD3L2Q8NHZ7 208 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 RNF145Q96MT1 663 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 TRNT1Q96Q11 434 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 NPAS1Q99742 590 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 PAIP1Q9H074 479 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 FGFR1OP2Q9NVK5 253 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 TMEM45AQ9NWC5 275 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 STOML1Q9UBI4 398 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 ICAM5Q9UMF0 924 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 PCDHB14Q9Y5E9 798 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 AP4B1Q9Y6B7 739 aa18.69■□□□□ 0.58
HCFC1R1-208ENST00000575214 H0YC42 278 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 HNRNPRO43390 633 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 EIF4E2O60573 245 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CSTAP01040 98 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 SNRPB2P08579 225 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 ETFAP13804 333 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CAPN3P20807 821 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 MAGEA8P43361 318 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 TPD52P55327 224 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CLDN20P56880 219 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 EEFSECP57772 596 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CHRNEQ04844 493 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 MAPK14Q16539 360 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 EIF3MQ7L2H7 374 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 ADGRE4PQ86SQ3 457 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 GRAMD2AQ8IUY3 354 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 C9orf106Q8NAJ2 232 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 TMEM120AQ9BXJ8 343 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 SAP130Q9H0E3 1048 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CLCF1Q9UBD9 225 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 L3MBTL1Q9Y468 752 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 A0A096LPI6 279 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 C7orf72A4D263 438 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 DVL2O14641 736 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 CHRM4P08173 479 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 LINGO3P0C6S8 592 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 COX6B1P14854 86 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 BMP5P22003 454 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 SUCLG1P53597 346 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 MVDP53602 400 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 DSTNP60981 165 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 FOXF1Q12946 379 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 SLC25A35Q3KQZ1 300 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 LRRC74BQ6ZQY2 392 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 P4HA3Q7Z4N8 544 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 HMGN2P46Q86SG4 172 aa18.68■□□□□ 0.58
HCFC1R1-208ENST00000575214 TOR1AIP2Q8NFQ8 470 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms