RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 PGM1P36871 562 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 NCALDP61601 193 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 SKP2Q13309 424 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 ELOAQ14241 798 aaKnown RBP15.57■□□□□ 0.08
NUP88-210ENST00000574867 GANABQ14697 944 aaKnown RBP15.57■□□□□ 0.08
NUP88-210ENST00000574867 INPP5JQ15735 1006 aaPredicted RBP15.57■□□□□ 0.08
NUP88-210ENST00000574867 GRAMD2AQ8IUY3 354 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 FAM156AQ8NDB6 213 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 OR2M3Q8NG83 312 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 B4GALNT2Q8NHY0 566 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 MCUR1Q96AQ8 359 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 PINK1Q9BXM7 581 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 LAT2Q9GZY6 243 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 MUC13Q9H3R2 512 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 EVA1AQ9H8M9 152 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 TFECO14948 347 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 UBTFL6P0CB48 400 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 ME2P23368 584 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 RFC3P40938 356 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 RNF144AP50876 292 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 P2RX1P51575 399 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 PPIAP62937 165 aaKnown RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 LRRC23Q53EV4 343 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 OR5M10Q6IEU7 315 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 ZNF440Q8IYI8 595 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 FAM109AQ8N4B1 249 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 TMCO5AQ8N6Q1 288 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 SLC35B4Q969S0 331 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 TAMM41Q96BW9 452 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 RNF145Q96MT1 663 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 GNRHR2Q96P88 292 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 UBQLN3Q9H347 655 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 EGFL7Q9UHF1 273 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 CARD8Q9Y2G2 431 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 SNX13Q9Y5W8 968 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 CLDN24A6NM45 220 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 C17orf51A8MQB3 221 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 OPN1SWP03999 348 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 GDF1P27539 372 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 DMTNQ08495 405 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 YTHDF3Q7Z739 585 aaKnown RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 TMEM251Q8N6I4 163 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 SH3YL1Q96HL8 342 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 MMADHCQ9H3L0 296 aaPredicted RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 DSN1Q9H410 356 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 KLHL28Q9NXS3 571 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 DNAJB12Q9NXW2 375 aaKnown RBP15.56■□□□□ 0.08
NUP88-210ENST00000574867 FBXL2Q9UKC9 423 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 SLC13A4Q9UKG4 626 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 ICAM5Q9UMF0 924 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 HRH3Q9Y5N1 445 aa15.56■□□□□ 0.08
NUP88-210ENST00000574867 FAM166BA8MTA8 275 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 SYT5O00445 386 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 PDE5AO76074 875 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 C8BP07358 591 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 CRYBA2P53672 197 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 DSCR4P56555 118 aaPredicted RBP15.55■□□□□ 0.08
NUP88-210ENST00000574867 ALDH6A1Q02252 535 aaKnown RBP15.55■□□□□ 0.08
NUP88-210ENST00000574867 GLYATQ6IB77 296 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 CBLN3Q6UW01 205 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 FAM162AQ96A26 154 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 BBC3Q96PG8 261 aaPredicted RBP15.55■□□□□ 0.08
NUP88-210ENST00000574867 CADM1Q9BY67 442 aaKnown RBP15.55■□□□□ 0.08
NUP88-210ENST00000574867 GORASP2Q9H8Y8 452 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 MED11Q9P086 117 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 BSNQ9UPA5 3926 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 ANKUB1A6NFN9 424 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 TTLL8A6PVC2 850 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 GSC2O15499 205 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 RFPL3SP0C7P2 107 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 UQCRBP14927 111 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 SRD5A2P31213 254 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 SLC6A8P48029 635 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 KCNJ5P48544 419 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 PLAURQ03405 335 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 NDUFAF6Q330K2 333 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 RNFT1Q5M7Z0 435 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 OR5W2Q8NH69 310 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 CNOT9Q92600 299 aaKnown RBP15.55■□□□□ 0.08
NUP88-210ENST00000574867 ASB9Q96DX5 294 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 ARSGQ96EG1 525 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 C1GALT1C1Q96EU7 318 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 ZDHHC11Q9H8X9 412 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 AGPAT4Q9NRZ5 378 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 ADPRHL2Q9NX46 363 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 DKKL1Q9UK85 242 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 BAG5Q9UL15 447 aa15.55■□□□□ 0.08
NUP88-210ENST00000574867 B4DXG7 233 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 FAM47E-STBD1D6RA91 191 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 ARPC2O15144 300 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 OIP5O43482 229 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 CYP7B1O75881 506 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 NCK1P16333 377 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 CD247P20963 164 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 MAGEA5P43359 124 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 CCR4P51679 360 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 CBFBQ13951 182 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 TRIM25Q14258 630 aaKnown RBP15.54■□□□□ 0.08
NUP88-210ENST00000574867 CYBRD1Q53TN4 286 aa15.54■□□□□ 0.08
NUP88-210ENST00000574867 ZNF550Q7Z398 422 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms