RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 LIPJQ5W064 366 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM215Q68D42 235 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 C12orf73Q69YU5 71 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 PLBD1Q6P4A8 553 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 AGTRAPQ6RW13 159 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 Q6ZTK2 550 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 C2orf73Q8N5S3 287 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 BBS10Q8TAM1 723 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SORCS1Q8WY21 1168 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 MYLIPQ8WY64 445 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 CNOT9Q92600 299 aaKnown RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 C10orf90Q96M02 699 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SLC46A2Q9BY10 475 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 BHLHE41Q9C0J9 482 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 AUNIPQ9H7T9 357 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 CHST2Q9Y4C5 530 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 FAM25EA8MYX2 175 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 FLRT2O43155 660 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SOX30O94993 753 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 UBL3O95164 117 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 WNT1P04628 370 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 FAM157BP0CG42 384 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 CXCL2P19875 107 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 CCR7P32248 378 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 PYCR1P32322 319 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 RAB13P51153 203 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ARFIP1P53367 373 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SMAD3P84022 425 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 RGS7BPQ6MZT1 257 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 FAAP20Q6NZ36 180 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 OLIG3Q7RTU3 272 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF614Q8N883 585 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 PIGXQ8TBF5 258 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 UBTD2Q8WUN7 234 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 FAM46AQ96IP4 442 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 NDC1Q9BTX1 674 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SYNDIG1Q9H7V2 258 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ASF1BQ9NVP2 202 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 AK6Q9Y3D8 172 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 AUP1Q9Y679 476 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 DVL2O14641 736 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 RNF13O43567 381 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 PAK4O96013 591 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 GNSP15586 552 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SYN1P17600 705 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 NPR2P20594 1047 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SLBPQ14493 270 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 BEX5Q5H9J7 111 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM201Q5SNT2 666 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 HTR3DQ70Z44 454 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 COMMD6Q7Z4G1 85 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ADCK2Q7Z695 626 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 CPOQ8IVL8 374 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SLC38A5Q8WUX1 472 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 NSMAFQ92636 917 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ALG8Q9BVK2 526 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 FAIM2Q9BWQ8 316 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 C14orf105Q9NVL8 296 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 C5AR2Q9P296 337 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SHISA3A0PJX4 238 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF705EA8MWA4 302 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 KIAA0355O15063 1070 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 GPR37L1O60883 481 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF254O75437 659 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 IL3P08700 152 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 BMP7P18075 431 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ATP5A1P25705 553 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 MAPK9P45984 424 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 GPR4P46093 362 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SLC6A11P48066 632 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 CSNK1DP48730 415 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 MTNR1BP49286 362 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 AP1S2P56377 157 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SLC7A9P82251 487 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF783Q6ZMS7 281 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 L3MBTL4Q8NA19 623 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ELP4Q96EB1 424 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 LRRC3BQ96PB8 259 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 CMSS1Q9BQ75 279 aaKnown RBP8.95□□□□□ -0.98
CCDC40-212ENST00000574799 SLC12A9Q9BXP2 914 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ABCG4Q9H172 646 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 ZSCAN32Q9NX65 697 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 NDRG3Q9UGV2 375 aa8.95□□□□□ -0.98
CCDC40-212ENST00000574799 C1orf226A1L170 272 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 MCRIP1C9JLW8 97 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LINC01387J3KSC0 135 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 RFXAPO00287 272 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FRS3O43559 492 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FGF18O76093 207 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ETHE1O95571 254 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LATS1O95835 1130 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 RB1P06400 928 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR12D1P0DN82 309 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF35P13682 527 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HLA-FP30511 346 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HMGA2P52926 109 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 DLX5P56178 289 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms