RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 IL23RQ5VWK5 629 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 SHEQ5VZ18 495 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 CDC73Q6P1J9 531 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 KRTAP1-3Q8IUG1 177 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 KRTCAP2Q8N6L1 136 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 ZNF527Q8NB42 609 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 POC1BQ8TC44 478 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 ADAMTS15Q8TE58 950 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 NUDT8Q8WV74 236 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 HS3ST6Q96QI5 342 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 PRPF18Q99633 342 aaKnown RBP18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 CCL19Q99731 98 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 PIGUQ9H490 435 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 PLSCR4Q9NRQ2 329 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 ZDHHC2Q9UIJ5 367 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 ROS1P08922 2347 aa18.92■□□□□ 0.62
CHRNB1-206ENST00000574054 CFLARO15519 480 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 LYPLA1O75608 230 aaPredicted RBP18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 IL11P20809 199 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 ADSLP30566 484 aaPredicted RBP18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 ARRB2P32121 409 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 SERPINB5P36952 375 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 ZNF117Q03924 483 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 FOXF1Q12946 379 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 ACKR1Q16570 336 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 KRTAP21-3Q3LHN1 58 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 LSM12Q3MHD2 195 aaKnown RBP18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 Q5PR19 223 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 DCST2Q5T1A1 773 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 C22orf34Q6ZV56 151 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 LILRA2Q8N149 483 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 ZNF614Q8N883 585 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 OSTF1Q92882 214 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 CAVIN3Q969G5 261 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 PIGTQ969N2 578 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 TUBGCP3Q96CW5 907 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 C18orf12Q96KH6 178 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 KLHL15Q96M94 604 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 KCNE3Q9Y6H6 103 aa18.91■□□□□ 0.62
CHRNB1-206ENST00000574054 H3BNH8 94 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 GTPBP1O00178 669 aaKnown RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 OIP5O43482 229 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 KRT16P08779 473 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 LINGO3P0C6S8 592 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 CREB1P16220 341 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 HOXB4P17483 251 aaPredicted RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 FPR1P21462 350 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 SHC1P29353 583 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 SOAT1P35610 550 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 EIF1P41567 113 aaKnown RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 CARD18P57730 90 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 MTERF4Q7Z6M4 381 aaKnown RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 BIVMQ86UB2 503 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 STK32CQ86UX6 486 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 OR5AK3PQ8NH89 298 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 PPP1R14CQ8TAE6 165 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 ROBO4Q8WZ75 1007 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 REXO5Q96IC2 774 aaKnown RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 MARK4Q96L34 752 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 PIP5K1AQ99755 562 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 SMR3AQ99954 134 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 ROPN1BQ9BZX4 212 aaPredicted RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 HOXD1Q9GZZ0 328 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 C12orf49Q9H741 205 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 ZNF395Q9H8N7 513 aaPredicted RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 ROPN1Q9HAT0 212 aaPredicted RBP18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 FANCFQ9NPI8 374 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 GLRX2Q9NS18 164 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 CARD8Q9Y2G2 431 aa18.9■□□□□ 0.62
CHRNB1-206ENST00000574054 NSD1Q96L73 2696 aaPredicted RBP18.89■□□□□ 0.62
CHRNB1-206ENST00000574054 TUBBP07437 444 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 BPGMP07738 259 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 PPP3CBP16298 524 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 PRPS1L1P21108 318 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 PGS1Q32NB8 556 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 NDUFAF6Q330K2 333 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 KLHL26Q53HC5 615 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 STAC2Q6ZMT1 411 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 Q71RC1 249 aaPredicted RBP18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 NATD1Q8N6N6 113 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 ATP6V1C2Q8NEY4 427 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 PSMA8Q8TAA3 256 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 SFXN5Q8TD22 340 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 COQ8BQ96D53 544 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 TIGARQ9NQ88 270 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 GPATCH2Q9NW75 528 aa18.89■□□□□ 0.61
CHRNB1-206ENST00000574054 NUP214P35658 2090 aaPredicted RBP18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 THBDP07204 575 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 INHBBP09529 407 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 LOXP28300 417 aaPredicted RBP18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 ELK4P28324 431 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 AGTR1P30556 359 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 BEX5Q5H9J7 111 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 GTF2IRD2BQ6EKJ0 949 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 CBLN3Q6UW01 205 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 C20orf204Q6ZNR8 217 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 BEND4Q6ZU67 534 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 GTF2IRD2Q86UP8 949 aa18.88■□□□□ 0.61
CHRNB1-206ENST00000574054 TMCO5AQ8N6Q1 288 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms