RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RASSF1Q9NS23 344 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PRAMEF27A3QJZ7 478 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 SCDO00767 359 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 STX11O75558 287 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 BCHEP06276 602 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 HOXB9P17482 250 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 TCEA1P23193 301 aaKnown RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 PPIBP23284 216 aaKnown RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 EVI2BP34910 448 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 PTGDSP41222 190 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 MVDP53602 400 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 FUT5Q11128 374 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 KEAP1Q14145 624 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 SLC30A6Q6NXT4 461 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 DPP10Q8N608 796 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 PCYOX1LQ8NBM8 494 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 MAL2Q969L2 176 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 LRRC58Q96CX6 371 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 ANKRD27Q96NW4 1050 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 TTTY12Q9BZ98 90 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 RAD21L1Q9H4I0 556 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 GID8Q9NWU2 228 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 PPP4R1LQ9P1A2 415 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 BOKQ9UMX3 212 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 WDR45Q9Y484 360 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 HRH3Q9Y5N1 445 aa12.1□□□□□ -0.47
CCDC40-205ENST00000571028 FLNAP21333 2647 aaKnown RBP12.1□□□□□ -0.47
CCDC40-205ENST00000571028 TRBV5-3A0A0A0MS03 114 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 TMEM247A6NEH6 219 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 FIGNL2A6NMB9 653 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 ACOT7O00154 380 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 FADS1O60427 444 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 TRAPPC6AO75865 159 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 SOX30O94993 753 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 SNX4O95219 450 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 H6PDO95479 791 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 AK1P00568 194 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 RAF1P04049 648 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 HEXAP06865 529 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 CHRM4P08173 479 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 RFPL3SP0C7P2 107 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 GDF1P27539 372 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 PEX19P40855 299 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 NUDT2P50583 147 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 CHRNEQ04844 493 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 DEFB113Q30KQ7 82 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
CCDC40-205ENST00000571028 CMPK2Q5EBM0 449 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 RABL3Q5HYI8 236 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 GCNT6Q5T4J0 391 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 APOOLQ6UXV4 268 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 C10orf111Q8N326 155 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 TMEM251Q8N6I4 163 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 OR1J4Q8NGS1 313 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 DUSP19Q8WTR2 217 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 GNRHR2Q96P88 292 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 QRSL1Q9H0R6 528 aaKnown RBP12.09□□□□□ -0.47
CCDC40-205ENST00000571028 EXO5Q9H790 373 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 ZFP64Q9NPA5 681 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 SDHAF3Q9NRP4 125 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 UBQLN4Q9NRR5 601 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
CCDC40-205ENST00000571028 ARL8BQ9NVJ2 186 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 P2RX2Q9UBL9 471 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
CCDC40-205ENST00000571028 ANKRD33BA6NCL7 494 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NPIPA2E9PIF3 369 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NPIPA3F8WFD2 350 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 GTPBP1O00178 669 aaKnown RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NDUFB5O43674 189 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CYP7B1O75881 506 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ANGPTL1O95841 491 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CELA3AP09093 270 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ACVR2AP27037 513 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 MAGEA5P43359 124 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ATP12AP54707 1039 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 TXNL4AP83876 142 aaKnown RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 MXRA7P84157 204 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 FOXO1Q12778 655 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 SNTA1Q13424 505 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CYP51A1Q16850 503 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms