RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 SCDO00767 359 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 HMGN2P05204 90 aaKnown RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 LAMP1P11279 417 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 HPGDP15428 266 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 AGTR1P30556 359 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 ASMTP46597 345 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 POU6F2P78424 691 aaPredicted RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 KLHL26Q53HC5 615 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 GTF2IRD2BQ6EKJ0 949 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 CBLN3Q6UW01 205 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 GTF2IRD2Q86UP8 949 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 COX18Q8N8Q8 333 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 UBLCP1Q8WVY7 318 aaPredicted RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 CDS1Q92903 461 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 ZNF524Q96C55 264 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 PLPPR2Q96GM1 343 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 STACQ99469 402 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 SRXN1Q9BYN0 137 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 ACTR6Q9GZN1 396 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 PIGUQ9H490 435 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 C12orf49Q9H741 205 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 PPCSQ9HAB8 311 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 DUSP22Q9NRW4 184 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
NDE1-203ENST00000570727 GIN1Q9NXP7 522 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 GIMAP2Q9UG22 337 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 TRAF6Q9Y4K3 522 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 KCNE3Q9Y6H6 103 aa13.18□□□□□ -0.3
NDE1-203ENST00000570727 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 HS3ST1O14792 307 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 PIP5K1BO14986 540 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 NTN1O95631 604 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 HSPA4LO95757 839 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 CHEK2O96017 543 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 TUBBP07437 444 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ME2P23368 584 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ALDH3A1P30838 453 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 SFTPDP35247 375 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 NR1H2P55055 460 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ZNF117Q03924 483 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 FOXF1Q12946 379 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 CAPRIN1Q14444 709 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 LASP1Q14847 261 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 ARL13AQ5H913 290 aaPredicted RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 PDSS1Q5T2R2 415 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 CDC73Q6P1J9 531 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 NUFIP2Q7Z417 695 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 R3HCC1LQ7Z5L2 792 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 WFDC8Q8IUA0 241 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 DDIASQ8IXT1 998 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ZNF611Q8N823 705 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 LILRB1Q8NHL6 650 aaPredicted RBP13.17□□□□□ -0.3
NDE1-203ENST00000570727 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 RNF128Q8TEB7 428 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ABHD3Q8WU67 409 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 TWIST2Q8WVJ9 160 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 JADE3Q92613 823 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 MID2Q9UJV3 735 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 CADP27708 2225 aa13.17□□□□□ -0.3
NDE1-203ENST00000570727 NPIPA5A0A0B4J1W7 369 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 NPIPA7E9PJI5 369 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 NPIPB9F8W1W9 429 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 ZNF195O14628 629 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 NPHS1O60500 1241 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 PEX11AO75192 247 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 NPIPA8P0DM63 369 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 PCSK6P29122 969 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 CCT3P49368 545 aaKnown RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 RNF144AP50876 292 aaPredicted RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 TOMM34Q15785 309 aaPredicted RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 ZNF239Q16600 458 aaKnown RBP13.16□□□□□ -0.3
NDE1-203ENST00000570727 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
NDE1-203ENST00000570727 STK32CQ86UX6 486 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 TUSC5Q8IXB3 177 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 BANPQ8N9N5 519 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 FBXO27Q8NI29 283 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 PHOSPHO1Q8TCT1 267 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 TMEM171Q8WVE6 324 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 OR5P2Q8WZ92 322 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 C3orf30Q96M34 536 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 MECRQ9BV79 373 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
NDE1-203ENST00000570727 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms