RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SPEGQ15772 3267 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SCN3AQ9NY46 2000 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 CENPVL1A0A0U1RR11 272 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 A0A1W2PQD3 144 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ALG1L2C9J202 215 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 M0R3H8 397 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 GNGT2O14610 69 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF264O43296 627 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 GMFGO60234 142 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TPST1O60507 370 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 FKBP6O75344 327 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 MFN2O95140 757 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ANGPTL1O95841 491 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 WDPCPO95876 746 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 F10P00742 488 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ITGB2P05107 769 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 FESP07332 822 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 C8BP07358 591 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCL3P10147 92 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 RPS4Y1P22090 263 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC6A8P48029 635 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 KCNJ5P48544 419 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF41P51814 821 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SUMO3P55854 103 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 COPZ1P61923 177 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SELENOWP63302 87 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 KCNJ10P78508 379 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 MS4A2Q01362 244 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 RHDQ02161 417 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SNTA1Q13424 505 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TUBA3CQ13748 450 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCNIQ14094 377 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 MAPK11Q15759 364 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF791Q3KP31 576 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC22A10Q63ZE4 541 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC30A6Q6NXT4 461 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TUBA3EQ6PEY2 450 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ENPP6Q6UWR7 440 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF550Q7Z398 422 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 VTCN1Q7Z7D3 282 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SYT9Q86SS6 491 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 MARCH3Q86UD3 253 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 CARM1Q86X55 608 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZADH2Q8N4Q0 377 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 AMER2Q8N7J2 671 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 POGLUT1Q8NBL1 392 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TOR1AIP2Q8NFQ8 470 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 FDCSPQ8NFU4 85 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR4C3Q8NH37 302 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF563Q8TA94 476 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 GRHL3Q8TE85 626 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PAQR8Q8TEZ7 354 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PSMF1Q92530 271 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 HGDQ93099 445 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 SH3YL1Q96HL8 342 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PYURFQ96I23 114 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 NODALQ96S42 347 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 DENND2DQ9H6A0 471 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PTGES2Q9H7Z7 377 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 GALNT9Q9HCQ5 603 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 FLRT3Q9NZU0 649 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TESQ9UGI8 421 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 GDF2Q9UK05 429 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 DKKL1Q9UK85 242 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 BOKQ9UMX3 212 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PCDHGA9Q9Y5G4 932 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 CHCHD2Q9Y6H1 151 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PIEZO1Q92508 2521 aa6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 PTPRZ1P23471 2315 aaPredicted RBP6.03□□□□□ -1.44
CTDNEP1-204ENST00000570484 TRAV17A0A0B4J275 112 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TCRBV5S2A0A599 114 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TCRBV3S1A0A5B6 114 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CDHR4A6H8M9 788 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 A6NHS1 94 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CLDN24A6NM45 220 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 NPIPB9F8W1W9 429 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 G3V3Y1 287 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 KLRC4-KLRK1H3BQV0 150 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 hCG_2039718K7EN88 272 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ACOT7O00154 380 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADAMDEC1O15204 470 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 EIF4E2O60573 245 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 DPM1O60762 260 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF354AO60765 605 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ENTPD5O75356 428 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 E2F6O75461 281 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SNX4O95219 450 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 PGCP20142 388 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TNFRSF1BP20333 461 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELAVL4P26378 380 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADH6P28332 368 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC7A1P30825 629 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 RYKP34925 604 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 GCKP35557 465 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CASP3P42574 277 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR1E2P47887 323 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ST13P50502 369 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TAS2R41P59536 307 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 GPR85P60893 370 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 EEF1A1P68104 462 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms