RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CEACAM7Q14002 265 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 DPYSQ14117 519 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 RBBP5Q15291 538 aaKnown RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 SPHARQ15513 63 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CCDC6Q16204 474 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ZNF74Q16587 644 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CCDC153Q494R4 210 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 DNAL1Q4LDG9 190 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 FASTKD1Q53R41 847 aaKnown RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 CFAP157Q5JU67 520 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 BSPRYQ5W0U4 402 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 WSCD1Q658N2 575 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 C19orf48Q6RUI8 117 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CLEC20AQ6ZU45 233 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SH2D5Q6ZV89 423 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 FCRLAQ7L513 359 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 PID1Q7Z2X4 250 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 TRMT11Q7Z4G4 463 aaKnown RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 TAF8Q7Z7C8 310 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 LINC00523Q86TU6 105 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 LCA5Q86VQ0 697 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 FAM228AQ86W67 206 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 PYROXD2Q8N2H3 581 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 DNAAF3Q8N9W5 541 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ZBTB44Q8NCP5 570 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 STKLD1Q8NE28 680 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 TRPV3Q8NET8 790 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CD99L2Q8TCZ2 262 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 AGAP11Q8TF27 550 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 N4BP2L2Q92802 583 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 NT5C3BQ969T7 300 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CERS2Q96G23 380 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SMARCD1Q96GM5 515 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 C16orf58Q96GQ5 468 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SENP8Q96LD8 212 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SAMD8Q96LT4 415 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 MYCBPQ99417 103 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 LGMNQ99538 433 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 TBC1D10AQ9BXI6 508 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ULBP1Q9BZM6 244 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 IL22Q9GZX6 179 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 GBA3Q9H227 469 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CXCL16Q9H2A7 254 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 DCLRE1BQ9H816 532 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 DMAP1Q9NPF5 467 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 FAM212BQ9NTI7 297 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 DDIT4Q9NX09 232 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 HACD3Q9P035 362 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ELF5Q9UKW6 265 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 ETV7Q9Y603 341 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CITO14578 2027 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 PDCD11Q14690 1871 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 GOLGA8QA0A0J9YX86 632 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 GOLGA8OA6NCC3 632 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 ARL5CA6NH57 179 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 YJEFN3A6XGL0 299 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 SRRM4A7MD48 611 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 A8MUI8 341 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 TMEM114B3SHH9 223 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 GOLGA8NF8WBI6 632 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 K7EPI3 171 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 KCNK1O00180 336 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 P2RY10O00398 339 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 TEX28O15482 410 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 HCRTO43612 131 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 UGT1A9O60656 530 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 PLIN3O60664 434 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 MAGEC1O60732 1142 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 CYTIPO60759 359 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 DUSP11O75319 330 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 SNNO75324 88 aaPredicted RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 TRMUO75648 421 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 NEBLO76041 1014 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 TRIM16O95361 564 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 CPNE6O95741 557 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 GUCA1CO95843 209 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 PDGFBP01127 241 aaPredicted RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 C1QAP02745 245 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 SERPINE1P05121 402 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 SERPINA6P08185 405 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 RPSAP08865 295 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 SLC2A2P11168 524 aaPredicted RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 RALBP11234 206 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 DNAJB1P25685 340 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 GRIA1P42261 906 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 MAGEA11P43364 429 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 SLC1A6P48664 564 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 CCNG1P51959 295 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 KPNA2P52292 529 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 GEMP55040 296 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 AQP5P55064 265 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 HSD17B7P56937 341 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 DCDC1P59894 354 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 BEX3Q00994 111 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 PPIDQ08752 370 aaKnown RBP3.24□□□□□ -1.89
UBR1-211ENST00000569971 CDH17Q12864 832 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 SGCGQ13326 291 aa3.24□□□□□ -1.89
UBR1-211ENST00000569971 MSLNQ13421 630 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 576.2 ms