RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 HPCAL1P37235 193 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SPAM1P38567 509 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 ACLYP53396 1101 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 IST1P53990 364 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 RAG2P55895 527 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 MRPS15P82914 257 aaKnown RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 MRPS6P82932 125 aaKnown RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 EWSR1Q01844 656 aaKnown RBP eCLIP4.06□□□□□ -1.76
CHD9-220ENST00000569794 OGDHQ02218 1023 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 IRF8Q02556 426 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CNTN1Q12860 1018 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 MFAP5Q13361 173 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 KLF5Q13887 457 aaPredicted RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 TFDP1Q14186 410 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 MEF2DQ14814 521 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 NCF4Q15080 339 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CHI3L2Q15782 390 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 USF2Q15853 346 aaPredicted RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 SLC35D3Q5M8T2 416 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 BEND6Q5SZJ8 279 aaPredicted RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 DDI2Q5TDH0 399 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 GPR157Q5UAW9 335 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SPECC1LQ69YQ0 1117 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 OR4C11Q6IEV9 310 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 OR7E24Q6IFN5 339 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SLC8B1Q6J4K2 584 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 UTS2BQ765I0 119 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 H2BFWTQ7Z2G1 175 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 DHDDSQ86SQ9 333 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 P2RY8Q86VZ1 359 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 GPALPP1Q8IXQ4 340 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CCDC65Q8IXS2 484 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 PYROXD2Q8N2H3 581 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 FBXL16Q8N461 479 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CLDN19Q8N6F1 224 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 TMEM104Q8NE00 496 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 TRPV1Q8NER1 839 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SDR9C7Q8NEX9 313 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 PROKR2Q8NFJ6 384 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 ZNF473Q8WTR7 871 aaKnown RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 MAIP1Q8WWC4 291 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SMPDL3AQ92484 453 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 NRGNQ92686 78 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CIDECQ96AQ7 238 aaPredicted RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 NXPE2Q96DL1 559 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 NEDD4LQ96PU5 975 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 MTMR9Q96QG7 549 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 UQCC2Q9BRT2 126 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 GAL3ST2Q9H3Q3 398 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 LY9Q9HBG7 655 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 MRPL47Q9HD33 250 aaKnown RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 LYRM4Q9HD34 91 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 ZDHHC18Q9NUE0 388 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.06□□□□□ -1.76
CHD9-220ENST00000569794 ZNF701Q9NV72 531 aaPredicted RBP4.06□□□□□ -1.76
CHD9-220ENST00000569794 GHRLQ9UBU3 117 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 CTSFQ9UBX1 484 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 ZDHHC2Q9UIJ5 367 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 RNF6Q9Y252 685 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 RASD1Q9Y272 281 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 SLC6A5Q9Y345 797 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 ATP6V1DQ9Y5K8 247 aa4.06□□□□□ -1.76
CHD9-220ENST00000569794 UMODL1Q5DID0 1318 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 A0A087X002 238 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 FAM74A7A6NL05 159 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 IQCF5A8MTL0 148 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 A8MXQ7 604 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 TMCO5BA8MYB1 307 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 TRAFD1O14545 582 aaPredicted RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 CASKO14936 926 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 RS1O15537 224 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 SH3BGRLO75368 114 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 ANXA9O76027 345 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 SERPIND1P05546 499 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 GTF2E2P29084 291 aaKnown RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 RORAP35398 523 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 UQCRFS1P47985 274 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 SGSHP51688 502 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 MYL6P60660 151 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 CDKL1Q00532 357 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 PAX5Q02548 391 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 RCAN2Q14206 197 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 SGSM1Q2NKQ1 1148 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 ZNF699Q32M78 642 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 ZFP69Q49AA0 526 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 FAM74A3Q4VXF1 159 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 FGD3Q5JSP0 725 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 TCHHL1Q5QJ38 904 aaPredicted RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 LGSNQ5TDP6 509 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 SLC22A10Q63ZE4 541 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 TCEAL6Q6IPX3 200 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 FAM171BQ6P995 826 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 Q6ZRG5 221 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 TRPT1Q86TN4 253 aaKnown RBP4.05□□□□□ -1.76
CHD9-220ENST00000569794 LINC00518Q8N0U6 118 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 KRT222Q8N1A0 295 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 DNAJC22Q8N4W6 341 aa4.05□□□□□ -1.76
CHD9-220ENST00000569794 FAM86B1Q8N7N1 296 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms