RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FNTBP49356 437 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MAZP56270 477 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 VBP1P61758 197 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PSG6Q00889 435 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF91Q05481 1191 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ACSM1Q08AH1 577 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 STX4Q12846 297 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MLLT11Q13015 90 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 GRM7Q14831 915 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 EXOSC7Q15024 291 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SPHARQ15513 63 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR1Q1Q15612 314 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNHIT3Q15649 155 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 GPR68Q15743 365 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CT45A2Q5DJT8 189 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 RPL13AP3Q6NVV1 102 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PLEKHM3Q6ZWE6 761 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SPATC1Q76KD6 591 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF550Q7Z398 422 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 REC114Q7Z4M0 266 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 WDR53Q7Z5U6 358 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF761Q86XN6 746 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 NRMQ8IXM6 262 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SHISA5Q8N114 240 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 VWA5B2Q8N398 1253 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 LNX2Q8N448 690 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MFSD4AQ8N468 514 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 IQCF1Q8N6M8 205 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF615Q8N8J6 731 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF485Q8NCK3 441 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 KBTBD8Q8NFY9 601 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR52R1Q8NGF1 315 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR52I1Q8NGK6 324 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR8D4Q8NGM9 314 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TEX47Q8TBZ9 253 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PIK3R3Q92569 461 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 RPL3LQ92901 407 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MVB12AQ96EY5 273 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 COX4I2Q96KJ9 171 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 LRR1Q96L50 414 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OPALINQ96PE5 141 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR5M11Q96RB7 305 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CCNL2Q96S94 520 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 IER2Q9BTL4 223 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF426Q9BUY5 554 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MND1Q9BWT6 205 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CDADC1Q9BWV3 514 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PLA2G12AQ9BZM1 189 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TRIM2Q9C040 744 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 HOXD1Q9GZZ0 328 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SPRTNQ9H040 489 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 DCSTAMPQ9H295 470 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 FN3KQ9H479 309 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TBC1D17Q9HA65 648 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 FOLH1BQ9HBA9 442 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM27Q9HBJ8 222 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 HHATLQ9HCP6 504 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PDE7BQ9NP56 450 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ADAP2Q9NPF8 381 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PRTFDC1Q9NRG1 225 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 STARD5Q9NSY2 213 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TBCCD1Q9NVR7 557 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 FBXO34Q9NWN3 711 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SIDT1Q9NXL6 827 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 DNAJC27Q9NZQ0 273 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CCDC59Q9P031 241 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SEC14L4Q9UDX3 406 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 PRODH2Q9UF12 536 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CLEC2DQ9UHP7 191 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 BAIAP2Q9UQB8 552 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CLCA2Q9UQC9 943 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM5Q9Y2B1 443 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 EXOSC1Q9Y3B2 195 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MMACHCQ9Y4U1 282 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 UGT2A1Q9Y4X1 527 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CDH10Q9Y6N8 788 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TRIOO75962 3097 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CCDC88CQ9P219 2028 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 SNRNP200O75643 2136 aaKnown RBP4.97□□□□□ -1.61
SF3B3-213ENST00000569687 A0A0B4J2E0 115 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 IGHV5-51A0A0C4DH38 117 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 CCDC163A0A0D9SF12 145 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 CENPVL1A0A0U1RR11 272 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 A0A1B0GX12 115 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 EFCAB7A8K855 629 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 M0R129 80 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 PEX12O00623 359 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 DSCR3O14972 297 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 KHNYNO15037 678 aaKnown RBP4.97□□□□□ -1.61
SF3B3-213ENST00000569687 ATXN7O15265 892 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-213ENST00000569687 NUDT21O43809 227 aaKnown RBP4.97□□□□□ -1.61
SF3B3-213ENST00000569687 PRAMEF2O60811 474 aa4.97□□□□□ -1.61
SF3B3-213ENST00000569687 CBFA2T3O75081 653 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms