RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 SGSHP51688 502 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ZNF805Q5CZA5 627 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 C1orf94Q6P1W5 598 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ISCA2Q86U28 154 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ARMC10Q8N2F6 343 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 C1GALT1C1Q96EU7 318 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ZNF385AQ96PM9 386 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 POLR2J2Q9GZM3 115 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 GSTO2Q9H4Y5 243 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 A8MT66 165 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 J3QW42 95 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 CXCR6O00574 342 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 MTHFD2P13995 350 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 POLR2JP52435 117 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 DCDP81605 110 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 OC90Q02509 493 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 EFEMP1Q12805 493 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 TAF10Q12962 218 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 DOC2BQ14184 412 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 FAM46CQ5VWP2 391 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 LRRTM1Q86UE6 522 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 THNSL2Q86YJ6 484 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 OR52P1PQ8NH57 321 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ZCCHC10Q8TBK6 192 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 CLCC1Q96S66 551 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 THAP7Q9BT49 309 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 BRINP2Q9C0B6 783 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 PTGES2Q9H7Z7 377 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 SDR39U1Q9NRG7 319 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 STOX2Q9P2F5 926 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 A6NNC1 897 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 LRRTM2O43300 516 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 NXPH2O95156 264 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 CD160O95971 181 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 CPT2P23786 658 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 CD200P41217 278 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 STXBP1P61764 594 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 MRPS11P82912 194 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 SEMG2Q02383 582 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 BOP1Q14137 746 aaKnown RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 RAB12Q6IQ22 244 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 TMEM71Q6P5X7 295 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 RANBP3LQ86VV4 465 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 NPAS3Q8IXF0 933 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 ZNF687Q8N1G0 1237 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 OR2G2Q8NGZ5 317 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 WBP2Q969T9 261 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 VOPP1Q96AW1 172 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 MYOZ1Q9NP98 299 aaPredicted RBP10.14□□□□□ -0.79
CLK3-226ENST00000569406 ARL5AQ9Y689 179 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 EYSQ5T1H1 3165 aa10.14□□□□□ -0.79
CLK3-226ENST00000569406 OR1I1O60431 355 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 NDUFS3O75489 264 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 CBR3O75828 277 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 IGHV2-5P01817 119 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 THBS1P07996 1170 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 ADH7P40394 386 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 CRYBB2P43320 205 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 AP3S2P59780 193 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 SEC61A1P61619 476 aaKnown RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 GAB1Q13480 694 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 TSTA3Q13630 321 aaPredicted RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 PGBD2Q6P3X8 592 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 FAM111BQ6SJ93 734 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 NAXDQ8IW45 347 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 GPR26Q8NDV2 337 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 NUDT8Q8WV74 236 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 TWIST2Q8WVJ9 160 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 RELTQ969Z4 430 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 L3HYPDHQ96EM0 354 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 WDR89Q96FK6 387 aaPredicted RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 SLC25A32Q9H2D1 315 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 MTG2Q9H4K7 406 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 DNAJC15Q9Y5T4 150 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 ZNF106Q9H2Y7 1883 aaKnown RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 A0A1W2PQ45 241 aaPredicted RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 A0A1W2PQY0 241 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 F11P03951 625 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 KLKB1P03952 638 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 ACHEP22303 614 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 SHC1P29353 583 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 SLC11A1P49279 550 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 PRKXP51817 358 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 SREBF2Q12772 1141 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 ZNF235Q14590 738 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 GSG1Q2KHT4 349 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 RNASE10Q5GAN6 216 aaKnown RBP10.13□□□□□ -0.79
CLK3-226ENST00000569406 GLB1LQ6UWU2 654 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 FBXO39Q8N4B4 442 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 NAXEQ8NCW5 288 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 OR8J2Q8NGG1 315 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 RPLP0P6Q8NHW5 317 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 RAD9AQ99638 391 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 MCOLN1Q9GZU1 580 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 PIGMQ9H3S5 423 aa10.13□□□□□ -0.79
CLK3-226ENST00000569406 MFSD1Q9H3U5 465 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms