RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 BMP7P18075 431 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 TCEA1P23193 301 aaKnown RBP13.16□□□□□ -0.3
COMMD4-225ENST00000569245 EVI2BP34910 448 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 GSK3BP49841 420 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 CRYZQ08257 329 aaKnown RBP13.16□□□□□ -0.3
COMMD4-225ENST00000569245 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■■ 28.5
COMMD4-225ENST00000569245 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PM20D2Q8IYS1 436 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 CDRT4Q8N9R6 151 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 OR4K17Q8NGC6 315 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 OR10A6Q8NH74 314 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 FBXO30Q8TB52 745 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PIK3R3Q92569 461 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 JADE3Q92613 823 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 NTNG2Q96CW9 530 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-225ENST00000569245 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 TAS2R10Q9NYW0 307 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PPP4R1LQ9P1A2 415 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 SLC7A8Q9UHI5 535 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 DKKL1Q9UK85 242 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 FBXL2Q9UKC9 423 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PACSIN3Q9UKS6 424 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PCDHGB3Q9Y5G1 929 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 NINQ8N4C6 2090 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 NKX2-6A6NCS4 301 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 FAM220BPB1ANY3 271 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 ACTL6AO96019 429 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 TP53BP2Q13625 1128 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
COMMD4-225ENST00000569245 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 ZCCHC12Q6PEW1 402 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 GALNT10Q86SR1 603 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 IFNEQ86WN2 208 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 RNF130Q86XS8 419 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 MCEMP1Q8IX19 187 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 RNF148Q8N7C7 305 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 PNPT1Q8TCS8 783 aaKnown RBP13.15□□□□□ -0.3
COMMD4-225ENST00000569245 C16orf58Q96GQ5 468 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 REXO5Q96IC2 774 aaKnown RBP13.15□□□□□ -0.3
COMMD4-225ENST00000569245 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 KCTD14Q9BQ13 255 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-225ENST00000569245 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 UGT2B28Q9BY64 529 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 THUMPD1Q9NXG2 353 aaKnown RBP13.15□□□□□ -0.3
COMMD4-225ENST00000569245 FLRT3Q9NZU0 649 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 Q9UFV3 132 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
COMMD4-225ENST00000569245 ADGRG4Q8IZF6 3080 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ITPR2Q14571 2701 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 FADS1O60427 444 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 TNFRSF21O75509 655 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 UTS2O95399 124 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ALOX5P09917 674 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 MATN1P21941 496 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 DPP4P27487 766 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ADH7P40394 386 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 CRATP43155 626 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 PRIM2P49643 509 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ANXA11P50995 505 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 GAS1P54826 345 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 SRYQ05066 204 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 TRAP1Q12931 704 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 BNIP2Q12982 314 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 NHSL2Q5HYW2 709 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 COX20Q5RI15 118 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 EXOSC6Q5RKV6 272 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ERICH5Q6P6B1 374 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ENPP6Q6UWR7 440 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 MARCH3Q86UD3 253 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 SLC16A11Q8NCK7 471 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 TNIP2Q8NFZ5 429 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 OR2T12Q8NG77 320 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 HOXB13Q92826 284 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 OTUB1Q96FW1 271 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 TRIB1Q96RU8 372 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 ACTRT3Q9BYD9 372 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 OR2B2Q9GZK3 357 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 DSN1Q9H410 356 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 RPH3AQ9Y2J0 694 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-225ENST00000569245 DNAJC13O75165 2243 aa13.14□□□□□ -0.31
COMMD4-225ENST00000569245 H0Y3Z8 333 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 CIB2O75838 187 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 SOX30O94993 753 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 NKX2-2O95096 273 aa13.13□□□□□ -0.31
COMMD4-225ENST00000569245 ETFAP13804 333 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms