RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 DAPL1A0PJW8 107 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 BTN3A3O00478 584 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 PEX12O00623 359 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 CHP2O43745 196 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 EML2O95834 649 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 TIMP1P01033 207 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 POU3F3P20264 500 aaPredicted RBP17.03■□□□□ 0.32
PKD1-235ENST00000568591 PRAMEF8Q5VWM4 474 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 PRAMEF7Q5VXH5 474 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 HBMQ6B0K9 141 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 VN1R4Q7Z5H5 301 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 OR13C2Q8NGS9 318 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 OR5W2Q8NH69 310 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 ZCCHC10Q8TBK6 192 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 SIDT1Q9NXL6 827 aaKnown RBP17.03■□□□□ 0.32
PKD1-235ENST00000568591 KCNE5Q9UJ90 142 aa17.03■□□□□ 0.32
PKD1-235ENST00000568591 KIAA0100Q14667 2235 aaKnown RBP17.02■□□□□ 0.32
PKD1-235ENST00000568591 CARNS1A5YM72 827 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 BHLHE40O14503 412 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 SLC19A2O60779 497 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 ZNF888P0CJ79 500 aaPredicted RBP17.02■□□□□ 0.32
PKD1-235ENST00000568591 IFNA8P32881 189 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 HCCSP53701 268 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 TRMT12Q53H54 448 aaKnown RBP17.02■□□□□ 0.32
PKD1-235ENST00000568591 TJAP1Q5JTD0 557 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 HEPHL1Q6MZM0 1159 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 SFXN4Q6P4A7 337 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 MEPCEQ7L2J0 689 aaKnown RBP17.02■□□□□ 0.32
PKD1-235ENST00000568591 C9orf62Q8N4C0 152 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 RAB42Q8N4Z0 105 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 OR11H7Q8NGC8 314 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 OR4D9Q8NGE8 314 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 RFT1Q96AA3 541 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 GTPBP2Q9BX10 602 aaKnown RBP17.02■□□□□ 0.32
PKD1-235ENST00000568591 MED17Q9NVC6 651 aa17.02■□□□□ 0.32
PKD1-235ENST00000568591 TRAV27A0A087WT01 109 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 A0A0G2JK05 382 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 ARHGEF9O43307 516 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 OR5F1O95221 314 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 CD3GP09693 182 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 MTNR1BP49286 362 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 OR12D2P58182 307 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.31
PKD1-235ENST00000568591 RFPL4BQ6ZWI9 263 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 SSX6Q7RTT6 188 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 CEACAM19Q7Z692 300 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 OR4E2Q8NGC2 313 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 CREB3L1Q96BA8 519 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 MOAP1Q96BY2 351 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 TEX12Q9BXU0 123 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 ANKRD19PQ9H560 264 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 NLGN3Q9NZ94 848 aa17.02■□□□□ 0.31
PKD1-235ENST00000568591 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 ZNF860A6NHJ4 632 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 UNC119BA6NIH7 251 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 SLC9B1P1A6NJY1 282 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 CEACAM5P06731 702 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 CXCL3P19876 107 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 MAT2AP31153 395 aaKnown RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 GJD3Q8N144 294 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 ZNF624Q9P2J8 865 aaPredicted RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 ZNF223Q9UK11 482 aaPredicted RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 J3QLW9 94 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 TRIM3O75382 744 aaPredicted RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 RFPL3O75679 317 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 ZNF19P17023 458 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 MRPL28Q13084 256 aaKnown RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 CEBPEQ15744 281 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 C2orf27AQ580R0 203 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 ANKRD54Q6NXT1 300 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 OAFQ86UD1 273 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 NRROSQ86YC3 692 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 OR11H4Q8NGC9 324 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 OR5J2Q8NH18 312 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 OR51A7Q8NH64 312 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 TRMT10AQ8TBZ6 339 aaKnown RBP17.01■□□□□ 0.31
PKD1-235ENST00000568591 PEX11GQ96HA9 241 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 C4orf36Q96KX1 117 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 TEKT2Q9UIF3 430 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 ADAM30Q9UKF2 790 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 NCKAP1Q9Y2A7 1128 aa17.01■□□□□ 0.31
PKD1-235ENST00000568591 HMGN1P05114 100 aa17■□□□□ 0.31
PKD1-235ENST00000568591 GAAP10253 952 aa17■□□□□ 0.31
PKD1-235ENST00000568591 PTBP1P26599 531 aaKnown RBP eCLIP17■□□□□ 0.31
PKD1-235ENST00000568591 UQCRC1P31930 480 aa17■□□□□ 0.31
PKD1-235ENST00000568591 OR3A3P47888 321 aa17■□□□□ 0.31
PKD1-235ENST00000568591 EEF1A1P68104 462 aaKnown RBP17■□□□□ 0.31
PKD1-235ENST00000568591 HTRA3P83110 453 aa17■□□□□ 0.31
PKD1-235ENST00000568591 DEFB134Q4QY38 66 aa17■□□□□ 0.31
PKD1-235ENST00000568591 LRRC28Q86X40 367 aaPredicted RBP17■□□□□ 0.31
PKD1-235ENST00000568591 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
PKD1-235ENST00000568591 SDF2Q99470 211 aa17■□□□□ 0.31
PKD1-235ENST00000568591 ORAI3Q9BRQ5 295 aa17■□□□□ 0.31
PKD1-235ENST00000568591 C1QTNF2Q9BXJ5 285 aa17■□□□□ 0.31
PKD1-235ENST00000568591 SLC6A17Q9H1V8 727 aa17■□□□□ 0.31
PKD1-235ENST00000568591 KCNN2Q9H2S1 579 aa17■□□□□ 0.31
PKD1-235ENST00000568591 SLCO1C1Q9NYB5 712 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms