RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PINK1	Q9BXM7	581 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	NUF2	Q9BZD4	464 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	DPY30	Q9C005	99 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	MEAF6	Q9HAF1	191 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	NEUROD4	Q9HD90	331 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	RASSF1	Q9NS23	344 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	PNPO	Q9NVS9	261 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	THAP1	Q9NVV9	213 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	PACSIN3	Q9UKS6	424 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	EDAR	Q9UNE0	448 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	VDAC3	Q9Y277	283 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF175	Q9Y473	711 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	KCNE3	Q9Y6H6	103 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	TMEM120B	A0PK00	339 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	C7orf72	A4D263	438 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SHISA8	B8ZZ34	492 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	EIF1AY	O14602	144 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	MSTN	O14793	375 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CASK	O14936	926 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SEC14L5	O43304	696 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CPSF4	O95639	269 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF17	P17021	662 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	UQCRC2	P22695	453 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ME2	P23368	584 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PSMA4	P25789	261 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	DNAJA1	P31689	397 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	S100A3	P33764	101 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SOAT1	P35610	550 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	EIF1	P41567	113 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	KIR2DL2	P43627	348 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CPA2	P48052	419 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PCYT1A	P49585	367 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLNS1A	P54105	237 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SLC18A1	P54219	525 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	WDR4	P57081	412 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CARD18	P57730	90 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	RAC1	P63000	192 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PHC1	P78364	1004 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	BST1	Q10588	318 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	FGFBP1	Q14512	234 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PON3	Q15166	354 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	TESK1	Q15569	626 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CD226	Q15762	336 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PLPPR5	Q32ZL2	321 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SWT1	Q5T5J6	900 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ANXA8L1	Q5VT79	327 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ATG16L1	Q676U5	607 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SPATA19	Q7Z5L4	167 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	BTLA	Q7Z6A9	289 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLECL1	Q8IZS7	167 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	METTL25	Q8N6Q8	603 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR4A15	Q8NGL6	344 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	LINC01560	Q8TB33	94 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	FNDC9	Q8TBE3	224 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SMPDL3B	Q92485	455 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	NRGN	Q92686	78 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	TESC	Q96BS2	214 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SH3YL1	Q96HL8	342 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF845	Q96IR2	970 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	DACH2	Q96NX9	599 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	GPATCH1	Q9BRR8	931 aa	Known RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	SLC39A3	Q9BRY0	314 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PRRG4	Q9BZD6	226 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	RNF122	Q9H9V4	155 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	MED17	Q9NVC6	651 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	GALNT8	Q9NY28	637 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	ELOVL5	Q9NYP7	299 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	NKIRAS1	Q9NYS0	192 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	NDRG3	Q9UGV2	375 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	DTNA	Q9Y4J8	743 aa		6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.22	□□□□□ -1.41
SF3B3-209	ENST00000567635	C2CD3	Q4AC94	2353 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	NPIPA5	A0A0B4J1W7	369 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SH3D21	A4FU49	640 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	TRPC5OS	A6NMA1	111 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	HMGB1P1	B2RPK0	211 aa	Predicted RBP	6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	NPIPA7	E9PJI5	369 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	NPIPB9	F8W1W9	429 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLCO1B7	G3V0H7	640 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SDHD	O14521	159 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF195	O14628	629 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	ANKRD28	O15084	1053 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	ADAMDEC1	O15204	470 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	POLR3G	O15318	223 aa	Predicted RBP	6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	HDAC3	O15379	428 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	EIF4E2	O60573	245 aa	Known RBP	6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SCN2B	O60939	215 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SNN	O75324	88 aa	Predicted RBP	6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	STX11	O75558	287 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	AQP8	O94778	261 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	GOSR1	O95249	250 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	SYNGR4	O95473	234 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	NUDT14	O95848	222 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	AGR2	O95994	175 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	AK1	P00568	194 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	CGA	P01215	116 aa		6.21	□□□□□ -1.42
SF3B3-209	ENST00000567635	OPN1LW	P04000	364 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms