RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 NEIL3Q8TAT5 605 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 MAL2Q969L2 176 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZBTB8AQ96BR9 441 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 C1GALT1C1Q96EU7 318 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 SH3YL1Q96HL8 342 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 RTN4RQ9BZR6 473 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 SLC6A15Q9H2J7 730 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 DSN1Q9H410 356 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 TAS2R10Q9NYW0 307 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 MED11Q9P086 117 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZGRF1Q86YA3 2104 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 A0A1B0GTH9 108 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 FAM220BPB1ANY3 271 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 LINC01387J3KSC0 135 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ADAM10O14672 748 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SLC19A2O60779 497 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 DNAJA2O60884 412 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SERPINB7O75635 380 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 PGM3O95394 542 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ACTL6AO96019 429 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 CELA3AP09093 270 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 HK1P19367 917 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 GNLYP22749 145 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SLC6A8P48029 635 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 KCNJ10P78508 379 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 MXRA7P84157 204 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SKP2Q13309 424 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 CBFBQ13951 182 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SELPLGQ14242 412 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 MAPK11Q15759 364 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 RABL3Q5HYI8 236 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 NHSL2Q5HYW2 709 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 RPS26P11Q5JNZ5 115 aaPredicted RBP11.06□□□□□ -0.64
SF3B3-208ENST00000567250 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 RNF220Q5VTB9 566 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ENPP6Q6UWR7 440 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 OLIG3Q7RTU3 272 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SPPL2CQ8IUH8 684 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF440Q8IYI8 595 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 FITM2Q8N6M3 262 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 FAM71CQ8NEG0 241 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SFXN2Q96NB2 322 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 PIGQQ9BRB3 760 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 TRIM8Q9BZR9 551 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 LAT2Q9GZY6 243 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 QRSL1Q9H0R6 528 aaKnown RBP11.06□□□□□ -0.64
SF3B3-208ENST00000567250 SPAG4Q9NPE6 437 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 EXOSC3Q9NQT5 275 aaKnown RBP11.06□□□□□ -0.64
SF3B3-208ENST00000567250 STOML1Q9UBI4 398 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF443Q9Y2A4 671 aaPredicted RBP11.06□□□□□ -0.64
SF3B3-208ENST00000567250 CARD8Q9Y2G2 431 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 LIPGQ9Y5X9 500 aa11.06□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 MYO18BQ8IUG5 2567 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 CENPVL1A0A0U1RR11 272 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 C7orf72A4D263 438 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 FIGNL2A6NMB9 653 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 GMFGO60234 142 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 CYP7B1O75881 506 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 TPOP07202 933 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 PABPC4LP0CB38 370 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 UBTFL6P0CB48 400 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 ESRRAP11474 423 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 PGCP20142 388 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 CALB2P22676 271 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 CHMP24386 653 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 PGM1P36871 562 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 EIF1P41567 113 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 SLC7A2P52569 658 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 HSF1Q00613 529 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 SF3B4Q15427 424 aaKnown RBP eCLIP11.05□□□□□ -0.642e-7■■■■■ 27
SF3B3-208ENST00000567250 MAPK14Q16539 360 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 VMACQ2NL98 169 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF311Q5JNZ3 666 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 WIPI1Q5MNZ9 446 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 MRPL2Q5T653 305 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 C16orf89Q6UX73 402 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 YRDCQ86U90 279 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 RP1L1Q8IWN7 2480 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 ZZZ3Q8IYH5 903 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 PM20D2Q8IYS1 436 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 C10orf111Q8N326 155 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 TNIP2Q8NFZ5 429 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 OR2T12Q8NG77 320 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 OR5W2Q8NH69 310 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 FAM57AQ8TBR7 257 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 RASSF5Q8WWW0 418 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 GPATCH1Q9BRR8 931 aaKnown RBP11.05□□□□□ -0.64
SF3B3-208ENST00000567250 EVA1AQ9H8M9 152 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 KCNE5Q9UJ90 142 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 SLC13A4Q9UKG4 626 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 ACAD8Q9UKU7 415 aa11.05□□□□□ -0.64
SF3B3-208ENST00000567250 ICAM5Q9UMF0 924 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms