RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FABP6P51161 128 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 CHN2P52757 468 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 RPS3AP61247 264 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 RPS13P62277 151 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 PLIN5Q00G26 463 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 HMGCS1Q01581 520 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 BIKQ13323 160 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 E2F2Q14209 437 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 TAB1Q15750 504 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 HIST2H2ACQ16777 129 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 IMPG1Q17R60 797 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 CTU2Q2VPK5 515 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 GALNTL6Q49A17 601 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 NXNQ6DKJ4 435 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 HIST2H2AA3Q6FI13 130 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 PPP4R4Q6NUP7 873 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 SLC30A6Q6NXT4 461 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 TRIM40Q6P9F5 258 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 FIGNL1Q6PIW4 674 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 EPGNQ6UW88 154 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 TMEM64Q6YI46 380 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 GLCCI1Q86VQ1 547 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 LAS2Q8IYD9 372 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 SVOPLQ8N434 492 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 ANKRD53Q8N9V6 530 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 OR7G3Q8NG95 312 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 OR2T11Q8NH01 316 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 HUS1BQ8NHY5 278 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 FNDC9Q8TBE3 224 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 HPS1Q92902 700 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 GFM2Q969S9 779 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 UBE2E3Q969T4 207 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 RBM18Q96H35 190 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 OR52B2Q96RD2 323 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 SERINC2Q96SA4 455 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 DHRS9Q9BPW9 319 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 OSBPL11Q9BXB4 747 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 MMP27Q9H306 513 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 MEAF6Q9HAF1 191 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 DDX28Q9NUL7 540 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 KLRF1Q9NZS2 232 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 ING1Q9UK53 422 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 EXO1Q9UQ84 846 aaKnown RBP8.61□□□□□ -1.03
CAPN3-216ENST00000567071 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
CAPN3-216ENST00000567071 C2orf92A0A1B0GVN3 265 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 DPRXA6NFQ7 191 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 CCT8L1PA6NM43 557 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SHISA9B4DS77 424 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 C4orf51C9J302 202 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 E9PBE3 544 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 ABCD4O14678 606 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 EPHA1P21709 976 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 STT3AP46977 705 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 LIM2P55344 173 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 PHEXP78562 749 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 ID2Q02363 134 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 EBPQ15125 230 aaKnown RBP8.6□□□□□ -1.03
CAPN3-216ENST00000567071 PON3Q15166 354 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 XKR7Q5GH72 579 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 VAX1Q5SQQ9 334 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 PIGWQ7Z7B1 504 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 TUBGCP3Q96CW5 907 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 GMPPAQ96IJ6 420 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-216ENST00000567071 FOXN4Q96NZ1 517 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 CSF3RQ99062 836 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SIKE1Q9BRV8 207 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SOX7Q9BT81 388 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 POTEKPQ9BYX7 375 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 ACPTQ9BZG2 426 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SLITRK2Q9H156 845 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 TCF7L2Q9NQB0 619 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 DAPP1Q9UN19 280 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SLC12A4Q9UP95 1085 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 GRIP1Q9Y3R0 1128 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 EXPH5Q8NEV8 1989 aa8.6□□□□□ -1.03
CAPN3-216ENST00000567071 SLC28A1O00337 649 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SAP18O00422 153 aaKnown RBP8.59□□□□□ -1.03
CAPN3-216ENST00000567071 RGS14O43566 566 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 PEX11AO75192 247 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 LY6HO94772 140 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 BCL10O95999 233 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 TGFB1P01137 390 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 CDH15P55291 814 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SLC37A1P57057 533 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 ERVK-8P63133 956 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 RPL38P63173 70 aaKnown RBP8.59□□□□□ -1.03
CAPN3-216ENST00000567071 IL13RA1P78552 427 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 CSTF3Q12996 717 aaKnown RBP8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SNTA1Q13424 505 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 GUSBP1Q15486 140 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SGCBQ16585 318 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 LSM12Q3MHD2 195 aaKnown RBP8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SPDYAQ5MJ70 313 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms