RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 DUSP22Q9NRW4 184 aa13.23□□□□□ -0.29
IFT140-207ENST00000566052 SIRT3Q9NTG7 399 aaPredicted RBP13.23□□□□□ -0.29
IFT140-207ENST00000566052 SH3BP4Q9P0V3 963 aa13.23□□□□□ -0.29
IFT140-207ENST00000566052 BAIAP2L1Q9UHR4 511 aa13.23□□□□□ -0.29
IFT140-207ENST00000566052 DNAJC15Q9Y5T4 150 aa13.23□□□□□ -0.29
IFT140-207ENST00000566052 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
IFT140-207ENST00000566052 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 EFNA2O43921 213 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 GCM2O75603 506 aaPredicted RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 SOX30O94993 753 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 FGF4P08620 206 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 PRIM2P49643 509 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 CARD18P57730 90 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 POU6F2P78424 691 aaPredicted RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 RNPS1Q15287 305 aaKnown RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 ZNF239Q16600 458 aaKnown RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 R3HCC1LQ7Z5L2 792 aaKnown RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 WFDC8Q8IUA0 241 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 STEAP2Q8NFT2 490 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 PSMA8Q8TAA3 256 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 FBXO30Q8TB52 745 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
IFT140-207ENST00000566052 PIGUQ9H490 435 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 TMEM185BQ9H7F4 350 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 ATP6V1HQ9UI12 483 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 ACTL7BQ9Y614 415 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 CADP27708 2225 aa13.22□□□□□ -0.29
IFT140-207ENST00000566052 KIAA1324LA8MWY0 1029 aaPredicted RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 COPEO14579 308 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 TRIM13O60858 407 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 CHEK2O96017 543 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 SHBGP04278 402 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 LINC00032P0C843 101 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 BCKDHAP12694 445 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 PCSK6P29122 969 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 ZNF117Q03924 483 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 PCLAFQ15004 111 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 UGT3A2Q3SY77 523 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 KLHL26Q53HC5 615 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 EIF1ADQ8N9N8 165 aaKnown RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 CCDC63Q8NA47 563 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 LILRB1Q8NHL6 650 aaPredicted RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 CLHC1Q8NHS4 586 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
IFT140-207ENST00000566052 HOXD1Q9GZZ0 328 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 C12orf49Q9H741 205 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 TIGARQ9NQ88 270 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 KLHL13Q9P2N7 655 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 MID2Q9UJV3 735 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 ICAM5Q9UMF0 924 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
IFT140-207ENST00000566052 STAB1Q9NY15 2570 aa13.21□□□□□ -0.3
IFT140-207ENST00000566052 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 INAFM1C9JVW0 142 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 OVOL3O00110 214 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 NTN1O95631 604 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 KRT4P19013 534 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 SHC1P29353 583 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 RPL3P39023 403 aaKnown RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 SUMO3P55854 103 aaPredicted RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 ATP5J2P56134 94 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 CCNJQ5T5M9 372 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 CBLN3Q6UW01 205 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 TFAP2EQ6VUC0 442 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 DNAJC14Q6Y2X3 702 aaPredicted RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 ROBO4Q8WZ75 1007 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 AKAP1Q92667 903 aaKnown RBP eCLIP13.2□□□□□ -0.3
IFT140-207ENST00000566052 CDS1Q92903 461 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 REXO5Q96IC2 774 aaKnown RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 MDFIQ99750 246 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 USB1Q9BQ65 265 aaKnown RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 SRXN1Q9BYN0 137 aa13.2□□□□□ -0.3
IFT140-207ENST00000566052 ZCCHC3Q9NUD5 404 aaKnown RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 GPC6Q9Y625 555 aaPredicted RBP13.2□□□□□ -0.3
IFT140-207ENST00000566052 CR1P17927 2039 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 GJE1A6NN92 205 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 NPIPB9F8W1W9 429 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 ETV2O00321 342 aaPredicted RBP13.19□□□□□ -0.3
IFT140-207ENST00000566052 ZNF195O14628 629 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 SCAMP2O15127 329 aaKnown RBP13.19□□□□□ -0.3
IFT140-207ENST00000566052 OIP5O43482 229 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 PRKD3O94806 890 aa13.19□□□□□ -0.3
IFT140-207ENST00000566052 DANCRP0C864 163 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms