RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KRT6CP48668 564 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 CDH13P55290 713 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
RNF40-208ENST00000565995 RNPS1Q15287 305 aaKnown RBP11.33□□□□□ -0.6
RNF40-208ENST00000565995 PLPPR5Q32ZL2 321 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 GRAMD1BQ3KR37 738 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 SH2D4BQ5SQS7 431 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 SSX8Q7RTT4 187 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 ANKRD42Q8N9B4 389 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 KBTBD8Q8NFY9 601 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 OSTF1Q92882 214 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 ELP4Q96EB1 424 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 HS6ST2Q96MM7 605 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 BBS4Q96RK4 519 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 NPAS1Q99742 590 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 MRPL57Q9BQC6 102 aaKnown RBP11.33□□□□□ -0.6
RNF40-208ENST00000565995 C12orf49Q9H741 205 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 C3orf14Q9HBI5 128 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 FAIMQ9NVQ4 179 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 CISD1Q9NZ45 108 aaKnown RBP11.33□□□□□ -0.6
RNF40-208ENST00000565995 DCDC2Q9UHG0 476 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 B3GALT5Q9Y2C3 310 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 WBP11Q9Y2W2 641 aaKnown RBP11.33□□□□□ -0.6
RNF40-208ENST00000565995 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 TNFSF11O14788 317 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ULK1O75385 1050 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 IGKV1D-16P01601 117 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 GSTA1P08263 222 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 CHN1P15882 459 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 CARD18P57730 90 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 CLCQ05315 142 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 SLC18A2Q05940 514 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ACSM2AQ08AH3 577 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ITGADQ13349 1161 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ZNHIT3Q15649 155 aaPredicted RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 ACSM2BQ68CK6 577 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 HBMQ6B0K9 141 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 ATG4DQ86TL0 474 aaPredicted RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 BANPQ8N9N5 519 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 FAM110BQ8TC76 370 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 MGARPQ8TDB4 240 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 APIPQ96GX9 242 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ZNF382Q96SR6 550 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 BEX2Q9BXY8 128 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 POTEKPQ9BYX7 375 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ACPTQ9BZG2 426 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 MRPL46Q9H2W6 279 aaKnown RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 GLIPR2Q9H4G4 154 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 ALG2Q9H553 416 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 SSU72Q9NP77 194 aaKnown RBP11.32□□□□□ -0.6
RNF40-208ENST00000565995 MKS1Q9NXB0 559 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 NKIRAS1Q9NYS0 192 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 KLHL13Q9P2N7 655 aa11.32□□□□□ -0.6
RNF40-208ENST00000565995 A0A1W2PRB8 838 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TMEM120BA0PK00 339 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 A8MT66 165 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 ZNF814B7Z6K7 855 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 SSX4O60224 188 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 RAMP1O60894 148 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 NKX2-2O95096 273 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 KCNH1O95259 989 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 ADAP00813 363 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 YES1P07947 543 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 LINGO3P0C6S8 592 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 SLC25A16P16260 332 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TSPAN8P19075 237 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 IL32P24001 234 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 LCN1P31025 176 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 CRHR1P34998 444 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 NCBP2P52298 156 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNF40-208ENST00000565995 MANFP55145 182 aaKnown RBP11.31□□□□□ -0.6
RNF40-208ENST00000565995 FAPQ12884 760 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TSC22D1Q15714 1073 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 ZNF239Q16600 458 aaKnown RBP11.31□□□□□ -0.6
RNF40-208ENST00000565995 TMEM201Q5SNT2 666 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 AGAP6Q5VW22 663 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 FAM219BQ5XKK7 198 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 PPP4R4Q6NUP7 873 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TMEM107Q6UX40 140 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 Q6ZT83 130 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 CDYL2Q8N8U2 506 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 TCP10LQ8TDR4 215 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 KISS1RQ969F8 398 aaPredicted RBP11.31□□□□□ -0.6
RNF40-208ENST00000565995 CPNE4Q96A23 557 aaPredicted RBP11.31□□□□□ -0.6
RNF40-208ENST00000565995 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 RNF145Q96MT1 663 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 AMDHD1Q96NU7 426 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms