RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
HERPUD1-210ENST00000565966 DTNAQ9Y4J8 743 aa12.53□□□□□ -0.4
HERPUD1-210ENST00000565966 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 GMNCA6NCL1 334 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 LINC01387J3KSC0 135 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 KIAA0513O60268 411 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 CRATP43155 626 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 STARP49675 285 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 LHX2P50458 406 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 RNF144AP50876 292 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 CHRNEQ04844 493 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 RGNQ15493 299 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 MAPK11Q15759 364 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 GPAT3Q53EU6 434 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 DLEU7Q6UYE1 221 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 LACC1Q8IV20 430 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 DPP10Q8N608 796 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 TRNT1Q96Q11 434 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 FAM53CQ9NYF3 392 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
HERPUD1-210ENST00000565966 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 H3BNH8 94 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 FBP2O00757 339 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ANGPT2O15123 496 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 OIP5O43482 229 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 GMFGO60234 142 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 TNFRSF21O75509 655 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 UGT2B17O75795 530 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 H6PDO95479 791 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 CHRM4P08173 479 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 NR2F1P10589 423 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 PEPDP12955 493 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 TCEA1P23193 301 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ADSLP30566 484 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 TIMP3P35625 211 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ADH7P40394 386 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 DSTNP60981 165 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 SRYQ05066 204 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 HSPB2Q16082 182 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 MAPK14Q16539 360 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 RAET1LQ5VY80 246 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 SEM1Q6ZVN7 128 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 DHDDSQ86SQ9 333 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF619Q8N2I2 560 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 PHOSPHO1Q8TCT1 267 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 ZG16BQ96DA0 208 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 SH3YL1Q96HL8 342 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 PIGQQ9BRB3 760 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 NSRP1Q9H0G5 558 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 SLC38A1Q9H2H9 487 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 RAD21L1Q9H4I0 556 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 P2RX2Q9UBL9 471 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 Q9UFV3 132 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
HERPUD1-210ENST00000565966 A0A087WZY1 265 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 SERINC4A6NH21 518 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 CD8B2A6NJW9 211 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 SNX3O60493 162 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 TOXO94900 526 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 IL2RAP01589 272 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 NUDT7P0C024 238 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 TFPTP0C1Z6 253 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 BMP2P12643 396 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF708P17019 499 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 PPIBP23284 216 aaKnown RBP12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 CLDN18P56856 261 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 HPCAP84074 193 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF117Q03924 483 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 FADDQ13158 208 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 RUNDC3AQ59EK9 446 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 CPLX4Q7Z7G2 160 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 C10orf111Q8N326 155 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 B4GALNT2Q8NHY0 566 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 OIT3Q8WWZ8 545 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 TRIB1Q96RU8 372 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 CPPED1Q9BRF8 314 aaPredicted RBP12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 UCK2Q9BZX2 261 aa12.5□□□□□ -0.41
HERPUD1-210ENST00000565966 IKZF5Q9H5V7 419 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms