RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NUFIP2Q7Z417 695 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 LILRA2Q8N149 483 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 GABRG1Q8N1C3 465 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 EIF1ADQ8N9N8 165 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 OR7A2PQ8NGA2 310 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 B4GALNT2Q8NHY0 566 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ZFP28Q8NHY6 868 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 PSMA8Q8TAA3 256 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 RNF128Q8TEB7 428 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 NUDT8Q8WV74 236 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ROBO4Q8WZ75 1007 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 MTERF3Q96E29 417 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 STACQ99469 402 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 MDFIQ99750 246 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 TRMOQ9BU70 441 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 BTBD2Q9BX70 525 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SRXN1Q9BYN0 137 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ACTR6Q9GZN1 396 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 IQCGQ9H095 443 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 HHATLQ9HCP6 504 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 DUSP22Q9NRW4 184 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ATP6V1HQ9UI12 483 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ICAM5Q9UMF0 924 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 TMED5Q9Y3A6 229 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 FIS1Q9Y3D6 152 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 KCNE3Q9Y6H6 103 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.19
CAPN3-213ENST00000565173 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 OVOL3O00110 214 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 SCDO00767 359 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 COPEO14579 308 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 SCAMP2O15127 329 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 TUBBP07437 444 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ALOX5P09917 674 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 LAMP1P11279 417 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 NEFHP12036 1026 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 HPGDP15428 266 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ADH6P28332 368 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 PCSK6P29122 969 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ARRB2P32121 409 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 SFTPDP35247 375 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 EIF1P41567 113 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ASMTP46597 345 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF41P51814 821 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 NR1H2P55055 460 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 POU6F2P78424 691 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 KRTAP1-1Q07627 177 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 FOXF1Q12946 379 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 LASP1Q14847 261 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 TOMM34Q15785 309 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF239Q16600 458 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 GALNTL6Q49A17 601 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ARL13AQ5H913 290 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 GTF2IRD2BQ6EKJ0 949 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ADAM5Q6NVV9 412 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 SEZ6L2Q6UXD5 910 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 LRIG3Q6UXM1 1119 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 TFAP2EQ6VUC0 442 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 SZRD1Q7Z422 152 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 MTERF4Q7Z6M4 381 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 GTF2IRD2Q86UP8 949 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 WFDC8Q8IUA0 241 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 C4orf33Q8N1A6 199 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF611Q8N823 705 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 COX18Q8N8Q8 333 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 CCDC63Q8NA47 563 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 RAB3IL1Q8TBN0 382 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 EPS8L3Q8TE67 593 aaKnown RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ABHD3Q8WU67 409 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 AKAP1Q92667 903 aaKnown RBP eCLIP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 CDS1Q92903 461 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 C3orf30Q96M34 536 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 KLHL15Q96M94 604 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 PIGUQ9H490 435 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 GPATCH2Q9NW75 528 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 GIMAP2Q9UG22 337 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ING1Q9UK53 422 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-213ENST00000565173 ADAM21Q9UKJ8 722 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 CARD8Q9Y2G2 431 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 TRAF6Q9Y4K3 522 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 COL6A5A8TX70 2615 aa7.64□□□□□ -1.19
CAPN3-213ENST00000565173 HIVEP2P31629 2446 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 USF3Q68DE3 2245 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ATRQ13535 2644 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 NPIPA5A0A0B4J1W7 369 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 SMIM23A6NLE4 172 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF814B7Z6K7 855 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 INAFM1C9JVW0 142 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 NPIPA7E9PJI5 369 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ETV2O00321 342 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF195O14628 629 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 PIP5K1BO14986 540 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 NPHS1O60500 1241 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 TMCC2O75069 709 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 HSPA4LO95757 839 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CHEK2O96017 543 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 DANCRP0C864 163 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 NPIPA8P0DM63 369 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms