RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TMEM109Q9BVC6 243 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 BHLHE41Q9C0J9 482 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 ANKZF1Q9H8Y5 726 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SIRT3Q9NTG7 399 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 C6orf203Q9P0P8 240 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 GPR52Q9Y2T5 361 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SNX8Q9Y5X2 465 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 GPC6Q9Y625 555 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SLU7O95391 586 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 AK1P00568 194 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 BPGMP07738 259 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 SLC6A8P48029 635 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 P2RX1P51575 399 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 ATP12AP54707 1039 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 NR1H2P55055 460 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 EMX2Q04743 252 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 LASP1Q14847 261 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 IL23RQ5VWK5 629 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 HBMQ6B0K9 141 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 P3H2Q8IVL5 708 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 RIMKLAQ8IXN7 391 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 KIRREL3Q8IZU9 778 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 FNDC5Q8NAU1 212 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 PHOSPHO1Q8TCT1 267 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 CDS1Q92903 461 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 CPNE4Q96A23 557 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 PIK3IP1Q96FE7 263 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 REXO5Q96IC2 774 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 C18orf12Q96KH6 178 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 MARK4Q96L34 752 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 KLHL15Q96M94 604 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 RNF145Q96MT1 663 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 TACO1Q9BSH4 297 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 KLHL4Q9C0H6 718 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 FBXO34Q9NWN3 711 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 SLC17A7Q9P2U7 560 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 ZDHHC2Q9UIJ5 367 aa10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 NUP214P35658 2090 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-204ENST00000564664 A0A0J9YW62 118 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 TMEM233B4DJY2 109 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 SHISA8B8ZZ34 492 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GTPBP1O00178 669 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF195O14628 629 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 TNFSF11O14788 317 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 CXCL13O43927 109 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GMFGO60234 142 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 EIF4E2O60573 245 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 TUBBP07437 444 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GUSBP08236 651 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 CLDN8P56748 225 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 PTGR1Q14914 329 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 SPDYE7PQ495Y7 208 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 BEX5Q5H9J7 111 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 DCST2Q5T1A1 773 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 CCNJQ5T5M9 372 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 ZAR1Q86SH2 424 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GALNT10Q86SR1 603 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 NUDCD3Q8IVD9 361 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 SLC43A2Q8N370 569 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GATSQ8NAP1 163 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 WFDC11Q8NEX6 87 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 TOR1AIP2Q8NFQ8 470 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 POC1BQ8TC44 478 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 ARSGQ96EG1 525 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 CHMP6Q96FZ7 201 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 SH3YL1Q96HL8 342 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 MRGPRX4Q96LA9 322 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 C3orf30Q96M34 536 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 DUSP26Q9BV47 211 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 MECRQ9BV79 373 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 GPATCH2Q9NW75 528 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 ASIC5Q9NY37 505 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 ICAM5Q9UMF0 924 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
GTF3C1-204ENST00000564664 NPIPB9F8W1W9 429 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 BIRC5O15392 142 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 SIAH2O43255 324 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 TYROBPO43914 113 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 DIAPH2O60879 1101 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 SPAG7O75391 227 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 PRKD3O94806 890 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 AGR2O95994 175 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 INHBBP09529 407 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 PAX1P15863 534 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 CCKARP32238 428 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 ETV4P43268 484 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 VSNL1P62760 191 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 CD226Q15762 336 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 EXOC3L2Q2M3D2 409 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 SLC25A53Q5H9E4 307 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 PPP4R4Q6NUP7 873 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms