RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PPLO60437 1756 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 ASXL1Q8IXJ9 1541 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 PIK3C2GO75747 1445 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 KRT8P05787 483 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 SLC35E2P0CK97 266 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00560-201ENST00000564593 SOX6P35712 828 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 GNPDA1P46926 289 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 PEX6Q13608 980 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 TPD52L1Q16890 204 aaPredicted RBP3.58□□□□□ -1.84
LINC00560-201ENST00000564593 ATAD3CQ5T2N8 411 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 ZNF57Q68EA5 555 aaPredicted RBP3.58□□□□□ -1.84
LINC00560-201ENST00000564593 SLC25A24Q6NUK1 477 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 ANKRD37Q7Z713 158 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 IFNEQ86WN2 208 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 MARCH9Q86YJ5 346 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 HPS6Q86YV9 775 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 CNIH3Q8TBE1 160 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 ADAMTS16Q8TE57 1224 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 RAB7BQ96AH8 199 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 SDSLQ96GA7 329 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 CASD1Q96PB1 797 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 OR5M11Q96RB7 305 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 SLC30A2Q9BRI3 323 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 MRPL39Q9NYK5 338 aaKnown RBP3.58□□□□□ -1.84
LINC00560-201ENST00000564593 EHFQ9NZC4 300 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 CRLS1Q9UJA2 301 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 NAALAD2Q9Y3Q0 740 aa3.58□□□□□ -1.84
LINC00560-201ENST00000564593 MYOM1P52179 1685 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 PTPRTO14522 1441 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 PPIAL4CA0A0B4J2A2 164 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ANGPT2O15123 496 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 GPAA1O43292 621 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 NOL4O94818 638 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 THY1P04216 161 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 PPIAL4GP0DN37 164 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 DRD5P21918 477 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ATP5A1P25705 553 aaKnown RBP3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ACADVLP49748 655 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 BDH1Q02338 343 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 RGS1Q08116 209 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 SERTAD2Q14140 314 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
LINC00560-201ENST00000564593 WDR43Q15061 677 aaKnown RBP eCLIP3.57□□□□□ -1.84
LINC00560-201ENST00000564593 TAF7Q15545 349 aaPredicted RBP3.57□□□□□ -1.84
LINC00560-201ENST00000564593 TMEM52BQ4KMG9 183 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 TEX44Q53QW1 395 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 SLC25A30Q5SVS4 291 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 CELF3Q5SZQ8 465 aaKnown RBP3.57□□□□□ -1.84
LINC00560-201ENST00000564593 GALNT17Q6IS24 598 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ZNF774Q6NX45 483 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 BLOC1S2Q6QNY1 142 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 C2orf66Q6UXQ4 117 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 DPY19L4Q7Z388 723 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 LYG1Q8N1E2 194 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 CCT8L2Q96SF2 557 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 CHRNA9Q9UGM1 479 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 CYTH4Q9UIA0 394 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 SPACA6W5XKT8 324 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 ABCA6Q8N139 1617 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 QRICH2Q9H0J4 1663 aa3.57□□□□□ -1.84
LINC00560-201ENST00000564593 CAMSAP1Q5T5Y3 1602 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 GSAPA4D1B5 854 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 A8MUI8 341 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 STX7O15400 261 aaKnown RBP3.56□□□□□ -1.84
LINC00560-201ENST00000564593 HBQ1P09105 142 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 ATP6V1C1P21283 382 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 XCR1P46094 333 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 TAF6P49848 677 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 SLC25A1P53007 311 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 SNTB2Q13425 540 aaKnown RBP3.56□□□□□ -1.84
LINC00560-201ENST00000564593 SLC36A3Q495N2 470 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 NADK2Q4G0N4 442 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 MARC1Q5VT66 337 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 OR8G2PQ6IF36 304 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 SPEM1Q8N4L4 309 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 CSNK1A1LQ8N752 337 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 CCDC26Q8TAB7 109 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 NANPQ8TBE9 248 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 M1APQ8TC57 530 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 ZNF107Q9UII5 783 aaPredicted RBP3.56□□□□□ -1.84
LINC00560-201ENST00000564593 ANAPC7Q9UJX3 599 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 SMC3Q9UQE7 1217 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 PPRC1Q5VV67 1664 aaKnown RBP3.56□□□□□ -1.84
LINC00560-201ENST00000564593 CFAP65Q6ZU64 1925 aaKnown RBP3.56□□□□□ -1.84
LINC00560-201ENST00000564593 ADGRB3O60242 1522 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 KIDINS220Q9ULH0 1771 aa3.56□□□□□ -1.84
LINC00560-201ENST00000564593 NEO1Q92859 1461 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 ANKRD26Q9UPS8 1709 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 FRG2CA6NGY1 282 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 SAGE2PA6NJ88 616 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 FAM220BPB1ANY3 271 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 CTAGE5O15320 804 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 UFL1O94874 794 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 DUSP14O95147 198 aaKnown RBP3.55□□□□□ -1.84
LINC00560-201ENST00000564593 OPN1LWP04000 364 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 PSMA5P28066 241 aa3.55□□□□□ -1.84
LINC00560-201ENST00000564593 NF2P35240 595 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms